Gene Pars_1191 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1191 
Symbol 
ID5054744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1079318 
End bp1080217 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content61% 
IMG OID640468739 
Productpirin domain-containing protein 
Protein accessionYP_001153412 
Protein GI145591410 
COG category[R] General function prediction only 
COG ID[COG1741] Pirin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.343867 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.264863 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGCG TAGGGTATGT ACTTAGAGGG AACTGGACCA GGGACGGAGC CGGCGTTAAG 
CTCTATAGGG TATTCGGCGG GATGGATCTG GCCGAGCTGA CCGACCCCTT CCTCCTCCTG
GACCACTTCG GGTCTAGATA TCCCCATGAA TACCTCATGG GCTTCCCATG GCACCCCCAC
AGAGGCATTG AGACCGTAAC ATACTTGCTA AAGGGTGAGG TGAAGCACGC GGACTCCACC
GGTGTTGAGG GGGTGATTAG AAGCGGCGAC GTCCAGTGGA TGACCGCGGG CTCCGGCATA
TTCCACGAGG AGATGCCACG CCCCGAGCGG ATACAACGGG GAGACGTCGT CGAGGAGGAC
CCGGAGGTGT CCGGCTTTCA GCTATGGGTC AACCTGCCTA GGCGGAGGAA GATGGCGGAT
CCCTCGTATA AGAACATCAG AAGGGAGGGG TTGCCCCGGC TGAGGACCGA CGAAGGGGCC
GAGGTGGTCC TCATAGCCGG GAGGCTCTAC GAGCCGGGGA CCGGCGTTGT CGCGGGCCCC
GCCTCCGACC TGCACACGCC TGTGGTCTAC ATGGACGTCA GATTGGCGAG CGGCGCAACC
TTCGAGTTTG AGGCCAAGGA GGGCTACACG GTGTTGGCGT ATGTCTACGG GGGGAGGGTC
TACCTAAACG GGAGGTCGAT AGGCGTGGGA GAGTTCGCCA TATTCGATAG AGAGGGCGGC
CCGATACGCG CTGAGGGCGA GGGCCGCTTC TTGCTCCTTT CGGGGAGGCC GCTGGGGGAG
CCCATAGCGT GGCGAGGGCC CATAGTTATG AACACGTGGG ATGAGATATG GCAGGCTTTC
AGAGAGTTGA AAGAAGGGAC GTTTATAAAG AAAAAGGCCT CCGTAGACGA CTACTGGTGA
 
Protein sequence
MARVGYVLRG NWTRDGAGVK LYRVFGGMDL AELTDPFLLL DHFGSRYPHE YLMGFPWHPH 
RGIETVTYLL KGEVKHADST GVEGVIRSGD VQWMTAGSGI FHEEMPRPER IQRGDVVEED
PEVSGFQLWV NLPRRRKMAD PSYKNIRREG LPRLRTDEGA EVVLIAGRLY EPGTGVVAGP
ASDLHTPVVY MDVRLASGAT FEFEAKEGYT VLAYVYGGRV YLNGRSIGVG EFAIFDREGG
PIRAEGEGRF LLLSGRPLGE PIAWRGPIVM NTWDEIWQAF RELKEGTFIK KKASVDDYW