| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1176 |
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| Symbol | |
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| ID | 5056042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | - |
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| Start bp | 1065061 |
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| End bp | 1066353 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640468726 |
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| Product | basic membrane lipoprotein |
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| Protein accession | YP_001153399 |
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| Protein GI | 145591397 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0623927 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACAA CCAGGAGGGA CTGGCTTAAA GTCGTGGCTT CCTTCGCCAC CGGCGCGGTG
CTGGGAGCCG CCGGCGGCTA CTACGCAGGC CTACAAAGCA TAAAAAAAGC AGTTGAGAAG
ACAACGACAT CAACCACAGT AGCCGAGGCT CCGAAAACAC AGATAGGCTT ACCGAAAATG
AAGATACACT TCATATACGT GGGGCCTGTC GGCGACTACG GCTGGACCCA CGCCCACGAC
CAGGGCAGGA AATTCCTGGA AAGGACCCTC TGTCCAGATC CCAATAAGTG GTGCATCGTG
GAGACTTCCT ACACCGAGAG CGTCCCAGAG GAGCAGGCGT ACAGCTATGT GAAAAACGCC
GTCTCCGGCG GCGCCCACAT GGTGATTACC ACCTCTTACG GCTTTATGGA CGGGACAAAG
AAAGCAGCGG CGGAGTACCC CGACCGATTC TTCGCCCACT GCTCAGGCTA CTTCAAAGAC
CAACAAGAGT GGAGCCGCCT ACAGAACTTT GCCGAGTACT TCATTGACCT CTACGAGGCC
TACTACCTCA ACGGCATTGT TGCCGGGAAG ATGACGAAGA CAAATAGGCT GGGTTACGTC
GCCGCGTTCC CCAAGTTGCC CGAGATCATC CGGCACATGA ACGCCTTTCT GATCGGCGCC
CGCGAGGTCA ACCCAAATGT GCAGATGGAC GTGGTGGGCC TCGGCGCGTG GTACGCCCCC
GAAAACGCCA CAAGAGCCGC CCAGGCGCTC GTCGACACCA ACGGCGTTGA CGTGCTCGCG
TTTACAGAGG ACTCCCCCGC AGTCCTCCAA GCTGCCGAGA ACTACCAGAA GCAGGGAAAG
AAGGTGTGGT CCTTCTCCCA CTACAGCGAC ATGTCCCAGT ACGGCCCCAA CGCCAACCTC
ACTGGGCAGA TAGTAAACTG GGGGCCGCTA TACGTGGAGA TGGCGATTAG GGCATACCTG
GCGTGGATAT CCGGCGTGCT GTCAATCTGG TCTGAATGGC CACCTGAAAG GCCCAGAGAC
TACTGGTGGA GCATGAAGAA CTCCTACGCC TACTACGACT ACAAGAAAAA CCCAGCAGAC
ATACTCCCCC TAAACCCAGC TGTGCCGGAC GAGGTGAGGA AATACGTCGA GGAGAGGAGG
AGGCAGATCA TAGAAGGCGT CTGGGACCCG TTCACGGGCC CCGTAAGAGA CATGCAGGGC
AAAGTGAGGG TGCCGGACAG GGCGAGGCTG AGCAAAGACG AGCTCTACAA CATGGATTGG
TACGTGGAGG GCTACCGCCA GCTACCCTCG TAG
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| Protein sequence | MSTTRRDWLK VVASFATGAV LGAAGGYYAG LQSIKKAVEK TTTSTTVAEA PKTQIGLPKM
KIHFIYVGPV GDYGWTHAHD QGRKFLERTL CPDPNKWCIV ETSYTESVPE EQAYSYVKNA
VSGGAHMVIT TSYGFMDGTK KAAAEYPDRF FAHCSGYFKD QQEWSRLQNF AEYFIDLYEA
YYLNGIVAGK MTKTNRLGYV AAFPKLPEII RHMNAFLIGA REVNPNVQMD VVGLGAWYAP
ENATRAAQAL VDTNGVDVLA FTEDSPAVLQ AAENYQKQGK KVWSFSHYSD MSQYGPNANL
TGQIVNWGPL YVEMAIRAYL AWISGVLSIW SEWPPERPRD YWWSMKNSYA YYDYKKNPAD
ILPLNPAVPD EVRKYVEERR RQIIEGVWDP FTGPVRDMQG KVRVPDRARL SKDELYNMDW
YVEGYRQLPS
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