Gene Pars_1171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1171 
Symbol 
ID5055257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1059986 
End bp1061221 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content62% 
IMG OID640468721 
Producttranslation initiation factor IF-2 subunit gamma 
Protein accessionYP_001153394 
Protein GI145591392 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG5257] Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.568284 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.119689 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTTCG TCTATCCAGA CGCCATTGTG TCCACAGCCG GCCACGTGGA CCACGGCAAG 
ACCCAGACTA CCTACGCCCT CTCGGGCGTC TGGGTCATGA AGCACAGCGA GGAGATAAAA
AAGGCCATGA CTATAAAGCT GGGGTACACC CAGATAGGGA TATACGACTG CGGCGACGAG
TACTACTACA GCGACGGCGT GTTGAAGGAG GGGAAGTGCC CCAACGGCGA GGAGCCCAAA
CTGGTGAGGC GGCTCTCGCT ACTAGACGTC CCGGGCCACG AGGTGCTGGT CGCCACGATG
GTCTCCGGCG CCGCTGTCGT CGACGGGGCG CTCTTGGTGG TGGACGCTTC CCAGCCCGCC
CCCCAGCCCC AGACAGCGGA GCACTTCGCC GTGTTGGACA TCATAGGCGT GAGGCACATG
GTGGTGGCCC AGAACAAGGT CGACCTAGTG ACGAAGGAGA AGGCCCTTGA AAACTACGAG
CAGATCAGGA GCTTCCTCGC CGGGACTTGG GCCGAGAAGG CGAAGATCAT CCCGATATCT
GCCTTGCACA AGGTCAACAT CGACGCCCTC GCCACGTACC TGGCCAAGGA GATTCCCAGG
AGGGAGGCGG AGCTGGGCAA GCCTGCCCGC TTCTCGGTGC TTAGGAGCTT CAACGTCAAC
CCGCCGGGCA CCCCGCCGGA GAAGCTCAGA GGCGGCGTCC TAGGCGGCAC GTTGCTACAA
GGCGTGTTGA GGGTAGGCGA CGAGATAGAG CTCAGGCCGG GGCTGAAGGT GGACAAGCCC
AAGCCCGGCT ACCAGCCCAT ATACACCAAG GTCCTCAGCA TCGAGTACAG CGGGTACAAG
GTAGAGGAGG CGCGGCCAGG GGGGCTGGTG GGCATAATGA CTGGGCTGGA CCCTGCGCTG
ACCAAGGCAG ATGCCCTAGC CGGCACAGTG GTCGGCAAGC CGGGGACCCT CCCGCCCGTG
TGGACTGCGA TAGAGGTGGA GACGAAGCCC ATCCCCAGAG CCGCTGGGGA GAAGCCCGAG
CCCTTCAAGC AGAACGAGGT TGTCCTACTC GCAGTGGGCC CCGCCACCGT CTTCGGAGTA
GTCCAAGCCG TGAAGAAAGA CGTAATCACC GTCGTCTTGA AAAAGGCGGT CTGCGCAGAA
CAGGGCTCGA AGGTGGTCGT TATCCGGCAG ATAAAGAACC GGTGGATAGT CACAAACTAC
GGCACCCTCA AAGGCGGCAC CGTGGCACTG GAATAG
 
Protein sequence
MTFVYPDAIV STAGHVDHGK TQTTYALSGV WVMKHSEEIK KAMTIKLGYT QIGIYDCGDE 
YYYSDGVLKE GKCPNGEEPK LVRRLSLLDV PGHEVLVATM VSGAAVVDGA LLVVDASQPA
PQPQTAEHFA VLDIIGVRHM VVAQNKVDLV TKEKALENYE QIRSFLAGTW AEKAKIIPIS
ALHKVNIDAL ATYLAKEIPR REAELGKPAR FSVLRSFNVN PPGTPPEKLR GGVLGGTLLQ
GVLRVGDEIE LRPGLKVDKP KPGYQPIYTK VLSIEYSGYK VEEARPGGLV GIMTGLDPAL
TKADALAGTV VGKPGTLPPV WTAIEVETKP IPRAAGEKPE PFKQNEVVLL AVGPATVFGV
VQAVKKDVIT VVLKKAVCAE QGSKVVVIRQ IKNRWIVTNY GTLKGGTVAL E