Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_1171 |
Symbol | |
ID | 5055257 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | + |
Start bp | 1059986 |
End bp | 1061221 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640468721 |
Product | translation initiation factor IF-2 subunit gamma |
Protein accession | YP_001153394 |
Protein GI | 145591392 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG5257] Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.568284 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.119689 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTTCG TCTATCCAGA CGCCATTGTG TCCACAGCCG GCCACGTGGA CCACGGCAAG ACCCAGACTA CCTACGCCCT CTCGGGCGTC TGGGTCATGA AGCACAGCGA GGAGATAAAA AAGGCCATGA CTATAAAGCT GGGGTACACC CAGATAGGGA TATACGACTG CGGCGACGAG TACTACTACA GCGACGGCGT GTTGAAGGAG GGGAAGTGCC CCAACGGCGA GGAGCCCAAA CTGGTGAGGC GGCTCTCGCT ACTAGACGTC CCGGGCCACG AGGTGCTGGT CGCCACGATG GTCTCCGGCG CCGCTGTCGT CGACGGGGCG CTCTTGGTGG TGGACGCTTC CCAGCCCGCC CCCCAGCCCC AGACAGCGGA GCACTTCGCC GTGTTGGACA TCATAGGCGT GAGGCACATG GTGGTGGCCC AGAACAAGGT CGACCTAGTG ACGAAGGAGA AGGCCCTTGA AAACTACGAG CAGATCAGGA GCTTCCTCGC CGGGACTTGG GCCGAGAAGG CGAAGATCAT CCCGATATCT GCCTTGCACA AGGTCAACAT CGACGCCCTC GCCACGTACC TGGCCAAGGA GATTCCCAGG AGGGAGGCGG AGCTGGGCAA GCCTGCCCGC TTCTCGGTGC TTAGGAGCTT CAACGTCAAC CCGCCGGGCA CCCCGCCGGA GAAGCTCAGA GGCGGCGTCC TAGGCGGCAC GTTGCTACAA GGCGTGTTGA GGGTAGGCGA CGAGATAGAG CTCAGGCCGG GGCTGAAGGT GGACAAGCCC AAGCCCGGCT ACCAGCCCAT ATACACCAAG GTCCTCAGCA TCGAGTACAG CGGGTACAAG GTAGAGGAGG CGCGGCCAGG GGGGCTGGTG GGCATAATGA CTGGGCTGGA CCCTGCGCTG ACCAAGGCAG ATGCCCTAGC CGGCACAGTG GTCGGCAAGC CGGGGACCCT CCCGCCCGTG TGGACTGCGA TAGAGGTGGA GACGAAGCCC ATCCCCAGAG CCGCTGGGGA GAAGCCCGAG CCCTTCAAGC AGAACGAGGT TGTCCTACTC GCAGTGGGCC CCGCCACCGT CTTCGGAGTA GTCCAAGCCG TGAAGAAAGA CGTAATCACC GTCGTCTTGA AAAAGGCGGT CTGCGCAGAA CAGGGCTCGA AGGTGGTCGT TATCCGGCAG ATAAAGAACC GGTGGATAGT CACAAACTAC GGCACCCTCA AAGGCGGCAC CGTGGCACTG GAATAG
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Protein sequence | MTFVYPDAIV STAGHVDHGK TQTTYALSGV WVMKHSEEIK KAMTIKLGYT QIGIYDCGDE YYYSDGVLKE GKCPNGEEPK LVRRLSLLDV PGHEVLVATM VSGAAVVDGA LLVVDASQPA PQPQTAEHFA VLDIIGVRHM VVAQNKVDLV TKEKALENYE QIRSFLAGTW AEKAKIIPIS ALHKVNIDAL ATYLAKEIPR REAELGKPAR FSVLRSFNVN PPGTPPEKLR GGVLGGTLLQ GVLRVGDEIE LRPGLKVDKP KPGYQPIYTK VLSIEYSGYK VEEARPGGLV GIMTGLDPAL TKADALAGTV VGKPGTLPPV WTAIEVETKP IPRAAGEKPE PFKQNEVVLL AVGPATVFGV VQAVKKDVIT VVLKKAVCAE QGSKVVVIRQ IKNRWIVTNY GTLKGGTVAL E
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