Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_1164 |
Symbol | |
ID | 5054547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | - |
Start bp | 1049932 |
End bp | 1051839 |
Gene Length | 1908 bp |
Protein Length | 635 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640468714 |
Product | aldehyde ferredoxin oxidoreductase |
Protein accession | YP_001153387 |
Protein GI | 145591385 |
COG category | [C] Energy production and conversion |
COG ID | [COG2414] Aldehyde:ferredoxin oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.19471 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.00826779 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGCGATTA AAGGAGTCAA CGGGGTTGTA GGTTTTGTAA ATTTATCTAC TGGCGAAGTG AAGAAGTTAC AAGTCCCAGC CGAAGTCTAC AGATACTTCC TCGGGGGCTA CGGCCTCGGG GCCTGGTTCG TCTACCGGCA CATGCAACGG GGAGCCGACC CCCTGGGCCC CGGCAATGTG CTTGGCATTG TCTCGGGGCT TCTAAACGCC GCGGGCATCC CCATGACTGG GAGGTCAGCG GCGGTGGGGA AGTCGCCCCA GACAGGGGGC TGGGGAGACG CCAACGCCGG GGGAAGGTTC GGGCCTAAGC TCATGGAGGC GGGGCTAGAC GCCATATTCG TAACAGGGGC CGCCGAGAAG CCGGTGTACA TCCTCGTAGA GAACGGCAAC ATATACATCG AAAACGCCTC CGACCTCTGG GGCAAGAACA CGAGGGAGAC GGAGGACGAG CTTAGACGTA GGCATAAGGG CTCCCAGGCT GTGGTGATAG GCCCTGCTGG GGAGAGGTTA CAGCTGATAG CCGCAATAAT TAACGAGTAC GGGAGGGCCT ACGGCCGCTC GGGCCTAGGC GCCGTCATGG GGAGCAAGAA GCTCAAGGCG ATAGTGGCGG TGGGGGACAA GAAGCCAGAG GTGTACGACC GGGAGCTCGT GAGGCAGAAA GTGATGGAGA TGGCCCAGAT GCTCAAGACC ACCAGGGCCA AGGCATATGA GATTTGGCAC AAATACGGGA CGATATCCAC CCTGGACTCC AGCGTCATGT CCGGCGACAC TCCCATAAAA AACTGGGCAG GCATAGGGCC AAGGGACTAC GGCGAGAAGA ACTTGGAGAA GTTCGGCACA AACACTGTGA TAAGGGACAA CGTCAAGCCC TACGCCTGCG CCAGCTGCCC AGTGGCCTGC GGCGCCTGGA TAAGGCGGGC CACGAGGTAC GGCGTGGTGG AGGGGCACAG GCTGGAGTAC GAGACGGCCT CCCTCTTCGG CCCCGCGCTA CTCGACGCAG ACCAAGACTC GGTGGTGTAC GCCGGGGAGC TGTGCAACCT CTACGGCCTA GACACAATAT CGACAGCAAG CGTAGTGGGG TTCGCCTTTG AGCTCTACGA GAGGGGCATC CTCACGGAGA GGGACGTCAG CTTCCCCCTG AGGTGGGGCG ACCCAGACGC CGTGGTCAAG CTGGTGGAGC TGATAGGGAA GGCCGAGGGC ATCGGCAAAG TGCTCGGCCA AGGAGTCAAA AAAGCCGCGG AGATCTTGGG CAGAGGCGCG GAACAGTACG CCATGCATGT CGGGGGACAG GAGCTACCAG CCCACCACCC CCAGTACCTA CCAGGCCTCG CCATCGCCTA CACCGGCGAC CCCACCCCGG CGAGGCACAC CGCCGGCGGC GTCCACTGGT GGGGAGAGGG AGGCAAGAGG CTCTGGGCCC CCTTCGACCT GGGGCAAGAC CTCGGCGCCT CGCCCAAGTA CGAATACGGC GACAAGGGCC GCAAAGCCGC CCTCATCACA ATGGCTGTCC AGGTGGAGAA CGCCCTGGGC TTCTGCCAGT TCTCCTCCTC AGTGATATAC CGCACCCTGC CCTACGCCGA CCTAATATAC GCCGTCACTG GGATGAAGTA CACCCCCCAA GAGCTGTTAA AAGTCGGCCA GAGAATACAA ACCCTAAGAC AGCTATTCAA CGTGAGAGAA GGCGCAAAAC CACGCGAGTG GAGGCTCCCC AGGAGGGTAC TGGAGCCCTT CCCAGAGGGC CCCCTCGCCG GGGTGAGGCT AACCGAGGAC GACGTGGAGA TGATGAGGGC GCAGTACTGG GAAGCCCTGG GCTGGGACCC CGCCACGGGC TACCCCAGAA GAGCCACAGT ACAAGAGCTG GGACTAGCAG AAATCGCGGC AGACGTCCTG GACCTACTAC CCCCCTAA
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Protein sequence | MAIKGVNGVV GFVNLSTGEV KKLQVPAEVY RYFLGGYGLG AWFVYRHMQR GADPLGPGNV LGIVSGLLNA AGIPMTGRSA AVGKSPQTGG WGDANAGGRF GPKLMEAGLD AIFVTGAAEK PVYILVENGN IYIENASDLW GKNTRETEDE LRRRHKGSQA VVIGPAGERL QLIAAIINEY GRAYGRSGLG AVMGSKKLKA IVAVGDKKPE VYDRELVRQK VMEMAQMLKT TRAKAYEIWH KYGTISTLDS SVMSGDTPIK NWAGIGPRDY GEKNLEKFGT NTVIRDNVKP YACASCPVAC GAWIRRATRY GVVEGHRLEY ETASLFGPAL LDADQDSVVY AGELCNLYGL DTISTASVVG FAFELYERGI LTERDVSFPL RWGDPDAVVK LVELIGKAEG IGKVLGQGVK KAAEILGRGA EQYAMHVGGQ ELPAHHPQYL PGLAIAYTGD PTPARHTAGG VHWWGEGGKR LWAPFDLGQD LGASPKYEYG DKGRKAALIT MAVQVENALG FCQFSSSVIY RTLPYADLIY AVTGMKYTPQ ELLKVGQRIQ TLRQLFNVRE GAKPREWRLP RRVLEPFPEG PLAGVRLTED DVEMMRAQYW EALGWDPATG YPRRATVQEL GLAEIAADVL DLLPP
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