Gene Pars_1160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1160 
Symbol 
ID5055936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1047462 
End bp1047935 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content57% 
IMG OID640468710 
ProductPaREP1 domain-containing protein 
Protein accessionYP_001153383 
Protein GI145591381 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.612279 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.00829062 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGGCCAAC ACGTGTCGCT TGTGATTTCG CCGCCGGTGG CCGAGGTCTT GCGGAAGGCG 
GCGGGGGGCC GGGACGTGGA GGAGTTTCTG CTAAAGCTTC TAGCGGAGAG GCTGGACCCG
CCTCAGCGGG TCGAGGTCTA TCTCAAGCTA CACGAGAAGT ACCTACAAGA GGCGGAGCAG
CTATACGCAA AGGGCGACCT TCCACAAGCC GGCGAGAAGT ACTGGGGCGC CGTCACCGCC
TTGCTAAACG CCATAGCAGA GAAGCGGGGA ATGCCCCACT ACAGCCATAG GGACTATGCG
GAAATAATAG AGGTGCTTTA CGCGGAAACT AAAGACAGAG AGCTGTTGGT GGGATTTAGC
CTGGGCGAAA GGCTCCATGC GAATTTCTAC TACAACTTTA TGAAAAGGGA GAGTTTTGAA
CTCCATCGAG AGGCCGTGCT GAGGCTCGTG GAGAGGCTAA GACGGTTTCT GTAA
 
Protein sequence
MGQHVSLVIS PPVAEVLRKA AGGRDVEEFL LKLLAERLDP PQRVEVYLKL HEKYLQEAEQ 
LYAKGDLPQA GEKYWGAVTA LLNAIAEKRG MPHYSHRDYA EIIEVLYAET KDRELLVGFS
LGERLHANFY YNFMKRESFE LHREAVLRLV ERLRRFL