Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_1160 |
Symbol | |
ID | 5055936 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | + |
Start bp | 1047462 |
End bp | 1047935 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640468710 |
Product | PaREP1 domain-containing protein |
Protein accession | YP_001153383 |
Protein GI | 145591381 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.612279 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.00829062 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGGGCCAAC ACGTGTCGCT TGTGATTTCG CCGCCGGTGG CCGAGGTCTT GCGGAAGGCG GCGGGGGGCC GGGACGTGGA GGAGTTTCTG CTAAAGCTTC TAGCGGAGAG GCTGGACCCG CCTCAGCGGG TCGAGGTCTA TCTCAAGCTA CACGAGAAGT ACCTACAAGA GGCGGAGCAG CTATACGCAA AGGGCGACCT TCCACAAGCC GGCGAGAAGT ACTGGGGCGC CGTCACCGCC TTGCTAAACG CCATAGCAGA GAAGCGGGGA ATGCCCCACT ACAGCCATAG GGACTATGCG GAAATAATAG AGGTGCTTTA CGCGGAAACT AAAGACAGAG AGCTGTTGGT GGGATTTAGC CTGGGCGAAA GGCTCCATGC GAATTTCTAC TACAACTTTA TGAAAAGGGA GAGTTTTGAA CTCCATCGAG AGGCCGTGCT GAGGCTCGTG GAGAGGCTAA GACGGTTTCT GTAA
|
Protein sequence | MGQHVSLVIS PPVAEVLRKA AGGRDVEEFL LKLLAERLDP PQRVEVYLKL HEKYLQEAEQ LYAKGDLPQA GEKYWGAVTA LLNAIAEKRG MPHYSHRDYA EIIEVLYAET KDRELLVGFS LGERLHANFY YNFMKRESFE LHREAVLRLV ERLRRFL
|
| |