Gene Pars_1143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1143 
Symbol 
ID5054893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1036041 
End bp1036406 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content59% 
IMG OID640468697 
Producthypothetical protein 
Protein accessionYP_001153371 
Protein GI145591369 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0299368 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCTCT ACATAGGCGT CGTAGACGTC GGAGGGCTGA GGGGCTATAT GTGGTTTTTG 
GGGAGGAGGC TCTACCTGAA GCTGGGCTGG CGGCCCCGCG ACACCGTCTT TTTGGGCAAC
CTCTCAGACC CCCTAGCCGT GGCGGCGAGG TTGAGGCGCC TATTGCCTAG GCCCGTCGAC
GAGCGAGGCT GTTGCCCACC TCCTCTTGCT CTGGCCCTGG ACATCTCGAT TATTTACGCC
AAGGCGAGGC CAGCCGCCTT GGGGGAGCCA GAGTTCTTGA CACGTTGCAT CGTCTTGACA
GCCAAGTGCT GGGGCAGTTA TGGGGGTATG GGTAGCATAA AGTCTAGAGG AGAATCAACT
CGGTAA
 
Protein sequence
MYLYIGVVDV GGLRGYMWFL GRRLYLKLGW RPRDTVFLGN LSDPLAVAAR LRRLLPRPVD 
ERGCCPPPLA LALDISIIYA KARPAALGEP EFLTRCIVLT AKCWGSYGGM GSIKSRGEST
R