Gene Pars_1132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1132 
Symbol 
ID5055190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1027932 
End bp1028423 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content56% 
IMG OID640468688 
ProductPaREP1 domain-containing protein 
Protein accessionYP_001153362 
Protein GI145591360 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.252197 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.319661 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACCTAG AGCTTGAAAA ACCGTGGAGA GATCTCAAGA AGTACATTGA GGGGAGGGCG 
AAGGAGGCGA GGTACGAGGC GGAGTTGGCT CTGAGGTTTC TCGAAGCCGG TTTGATGAGA
AATGCCGCAG GGAAGGCCTT CCAGGCATTT AAGGCGCTAC TGGGGGCCCT TGCCGCTAAG
CATAGGGAAT ATTTAGCGCA GAGGTACGGA AGCGTGAAGA GGCTTAGAAA CGGCAAGAGG
GTGTGGTACG CGGATTGGCT CATCGCTGCA GTCCCCACCA GCTTGTTGCT AGAACTAGCC
AGGGACCTCT CGCCGCTTGA GAGGCCCGAG CTTATGCGCT ACGCCAACAT CGCCCTGAAC
CTGCACGAGT TTCGATACAA CGGGCTTGAC AAGAGCGGTG TCTTAAGCAG ATATGCGAGG
ATTAGCTCTG TGGAGGAAGA CGTGAGGGCC TTGGCGACCT ACGTTGAGAA GAGGACCTCG
GAGCTAACCT AG
 
Protein sequence
MDLELEKPWR DLKKYIEGRA KEARYEAELA LRFLEAGLMR NAAGKAFQAF KALLGALAAK 
HREYLAQRYG SVKRLRNGKR VWYADWLIAA VPTSLLLELA RDLSPLERPE LMRYANIALN
LHEFRYNGLD KSGVLSRYAR ISSVEEDVRA LATYVEKRTS ELT