| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1110 |
|---|
| Symbol | |
|---|
| ID | 5055502 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | - |
|---|
| Start bp | 997275 |
|---|
| End bp | 997814 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640468666 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001153340 |
|---|
| Protein GI | 145591338 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02619] putative CRISPR-associated protein, APE2256 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000181027 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGTATC TCCTATCTGC GGTGGGCCTC TCGGCGCTGA AGGCCCTCGG CGTTTCTAGA
GAGGAGGCGG CCCGGCTCGC CGGCTCAAAG CTGGCCGGCT TCGCGGAGAG GTGTCCGGGG
CCTGGCAGGA TTGCCGAGCT ACATGTGGCT CTCGCCGTGT CTAGGCTGGC GGGGGGCCCG
GTGGAGCTGG AGCTCATCGC GACGGACACG CCGGAGGCCC TCTTGGCGGC TAGGCTGGTG
CTCCTCTGCG CGGAGGCCAC CGGCGCCGCA CGGCCGCTGG GCTTCGTGGC TGTTAAGCGC
TTCGCCCCGG GGTCCTACGA CGCTGCGGCG CAGCTCCTAA GGGCGGCTCT TGAGAGGCTG
GGGAGGGCGA GGGGGGAGAG GTTCGTCTCA ATAACCACGG GGTTCAACCT CGTGGCGGTG
TATCTGGCCC TGGCGGGGTG GATGGCGGGG GCGAGGGTGG TCTACGTGGA CGAGGGGGGC
GGGGTGCACG AGGTGCCGCG GGTGAGGGGG GCGCCGGGGG ACGTGGAGAT ATTTAAATAG
|
|---|
| Protein sequence | MTYLLSAVGL SALKALGVSR EEAARLAGSK LAGFAERCPG PGRIAELHVA LAVSRLAGGP
VELELIATDT PEALLAARLV LLCAEATGAA RPLGFVAVKR FAPGSYDAAA QLLRAALERL
GRARGERFVS ITTGFNLVAV YLALAGWMAG ARVVYVDEGG GVHEVPRVRG APGDVEIFK
|
|---|
| |