| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1103 |
|---|
| Symbol | |
|---|
| ID | 5054235 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | + |
|---|
| Start bp | 988878 |
|---|
| End bp | 989297 |
|---|
| Gene Length | 420 bp |
|---|
| Protein Length | 139 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640468659 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001153333 |
|---|
| Protein GI | 145591331 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2445] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.320757 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTGCTGG CGAAGCTCCT TGAGACCATT GCGGCACATG TCGAGTTGCT GGACGAGGCC
GCGAGGAGGG GCGTGGACTG GGGCGATACG CTGAGCTTAT ACGCCGTCCT CCACGCGCTT
CAGGTGCACA CCCAAGCCGT CATCGACTAC CTGCTCCGCA CCTGCTCCTT GCTGGGCGCC
TCAGTCGAAA CGCCGCTGGC GTGCGTGCAA GCCCTCCAGC AGAGGGGGTT GCTGGAAGGC
GGTGAGGCGG ATATGTTGCG CCGATTGATA CGCTTCAGGA ACATAGTGCT ACACCAATAC
GGCTCTATAG ACGTGGAGAG GGTCAAGAGG GTGCTGGAGG GGAGGGGCTA CCGCGACGCG
GCCCTTGTCG TAAGGAGAAT ACACGAGATG CTGAGGGAGA AGGGCATTGA AGATCCGTAG
|
|---|
| Protein sequence | MLLAKLLETI AAHVELLDEA ARRGVDWGDT LSLYAVLHAL QVHTQAVIDY LLRTCSLLGA
SVETPLACVQ ALQQRGLLEG GEADMLRRLI RFRNIVLHQY GSIDVERVKR VLEGRGYRDA
ALVVRRIHEM LREKGIEDP
|
|---|
| |