Gene Pars_1087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1087 
Symbol 
ID5055922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp973737 
End bp974171 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content61% 
IMG OID640468643 
ProductPadR-like family transcriptional regulator 
Protein accessionYP_001153317 
Protein GI145591315 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.7443 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTCCGC CTCCATGGGC GTTCCTCGGG AGAAGGGGCC TCAGGGAGGT GGTGTTGTGG 
CTTCTGTCAG ACAAGCCGAT GAACGGCGCG GAGATTATTA GAGCTGTGGA GGAGTTTACC
TGGGGCTTCT GGAGGCCGTC GCCTGGTTCC GTCTACCCGT TGCTGAGGCA ACTGGAGGCA
GAGGGGCTGG TCCGCCGGAG GCAGGACGGG CGCTACGAGC TCACCGAGGC CGGCCGCAAC
GCCGCTAGGC AGATCCCGTG GATACGAGGG CCCAAGTGGT GGGGCTGGTC TAAGAGCGTC
GGCGATTTGG TAGAGGAGTT GGAGAGCCTA GCCATGTACA TATCGGATAT CGCGGCTACT
GAGCCGGATA GGGTCACCCC GTATAAGGAT AGGATTAGGC ACATCGGCGA GTTGTTGCTA
AAGATCAGTG CCTAA
 
Protein sequence
MGPPPWAFLG RRGLREVVLW LLSDKPMNGA EIIRAVEEFT WGFWRPSPGS VYPLLRQLEA 
EGLVRRRQDG RYELTEAGRN AARQIPWIRG PKWWGWSKSV GDLVEELESL AMYISDIAAT
EPDRVTPYKD RIRHIGELLL KISA