Gene Pars_1058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1058 
Symbol 
ID5054373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp942286 
End bp942828 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content53% 
IMG OID640468614 
Producthypothetical protein 
Protein accessionYP_001153288 
Protein GI145591286 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.898959 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGATAA TACTAGACAT AGTCATATCT GTCCTGGCGC TATACGTAGC GTATAAGGTA 
TTCATGGCTT GGAGATCTCT TTCGGACATG AGGCTGTCCC TCTACTCTTT CGGCATGGCT
ATGCTTGCCG CGTCGCTGAT CGCCGAGGCT GTTGTGGATA TGTATTTGAG CAACTTACTG
GGGGAGGCGC CTATGCGGGC TGTGCGGAGG ATGGAAGCGG CGTTGAGGCT GACAATTCAG
ATTTTAAGCC TCGCAGCTTT AGTACCAGTG GCGATAGCGG TTACGCCAAC TGCGGCGTAT
GCGGTTCTCC CAATAGGTCT GATTCTAGCC CCGCTAAACG CCGTGTTGTC ATTCTACATC
GCAGGCGTCA CCTTTGTCAA GTCGCTAGAT AGGGGGTCGC CGCCTTATAT CTCGCTTGCC
TTCTTTTTCT ACGGCTTGTC CACTACGGCC CCTATACTCT CGTTGTTTGA TCTCCTAGCT
AGGCTACTCA CAGCGGTTTT TCTTGCGCTG AGCGTGTATC ATGCCCAAGC CACGGCGAAG
TAA
 
Protein sequence
MRIILDIVIS VLALYVAYKV FMAWRSLSDM RLSLYSFGMA MLAASLIAEA VVDMYLSNLL 
GEAPMRAVRR MEAALRLTIQ ILSLAALVPV AIAVTPTAAY AVLPIGLILA PLNAVLSFYI
AGVTFVKSLD RGSPPYISLA FFFYGLSTTA PILSLFDLLA RLLTAVFLAL SVYHAQATAK