| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1047 |
|---|
| Symbol | |
|---|
| ID | 5056382 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | + |
|---|
| Start bp | 932954 |
|---|
| End bp | 933589 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640468603 |
|---|
| Product | RNA 2'-phosphotransferase-like protein |
|---|
| Protein accession | YP_001153277 |
|---|
| Protein GI | 145591275 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1859] RNA:NAD 2'-phosphotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.376567 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.793229 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTCGGCG GGCTACACAA GTGCCAGATT TGCGGCGCCT ATACCGACGA GCCTACGCAC
TGCGGGAAAC CCGCTGTGTT GTTACTCGAC GGGAGCACCA GGCTAAGGGT TTCTAAGACC
TTATCCCTCG CCCTTAGGCA TAGCCCTGCC GTCCTCGGGC TGGTGTTAGA CAGCCGTGGC
TGGGGGGAAG TAGAGGCGGT GTTGAGGGGG CTGGATAGGG CTGGTCTAAA GATCAGCAGA
GAGGCGCTGG AGGCCGTGGT AGCCTTAGAC GACAAGGGCC GTTTTGAGAT GAGCAATGGC
AAGATAAGGG CTCGGTACGG CCACTCCATA GATGTTGAGG TAGAGTATGA GGTGGACGAA
GACTCCGCAT CTCTCTACCA CGGTACTTCT AAAGACAACC TCCCTTTCAT CATGGCTGTG
GGCATACTTC CCATGAAAAG GAAGTTCGTC CACCTAGCAA CCGACGTGGA CACAGCGTGT
CTAAACGCCG CGCGGAGGCC GAGCCCAATC GTAATTGAAG TAGACGCGGA ATGTCTAAGA
AGAAGCGGCG TCGTGATATA TATCGGAAGC CGCAAAATTA GGTTGGCAAA GTACGTGCCG
CAGAGTTGCA TAAAAAGAGT TTTCCAATGC CTATGA
|
|---|
| Protein sequence | MVGGLHKCQI CGAYTDEPTH CGKPAVLLLD GSTRLRVSKT LSLALRHSPA VLGLVLDSRG
WGEVEAVLRG LDRAGLKISR EALEAVVALD DKGRFEMSNG KIRARYGHSI DVEVEYEVDE
DSASLYHGTS KDNLPFIMAV GILPMKRKFV HLATDVDTAC LNAARRPSPI VIEVDAECLR
RSGVVIYIGS RKIRLAKYVP QSCIKRVFQC L
|
|---|
| |