Gene Pars_1010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1010 
Symbol 
ID5054838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp903027 
End bp903761 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content55% 
IMG OID640468568 
Productputative ATP binding protein 
Protein accessionYP_001153242 
Protein GI145591240 
COG category[R] General function prediction only 
COG ID[COG2102] Predicted ATPases of PP-loop superfamily 
TIGRFAM ID[TIGR00289] conserved hypothetical protein TIGR00289
[TIGR00290] MJ0570-related uncharacterized domain 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTTT GCGTATTATA CACCGGAGGA AAAGATAGCC ACTACGCCTT GTTAAAAGTG 
CTAGAAGCAG GACACGAAGT TGTCTGCCTG GCGACTGCCG CACCGATAAG GGAGGATTCC
TATATGTTCC ACTCAGTGAA TGTGCGGTGG AGTCTTCTAC ACGGCGAAGC CATGGGGTTG
CCTCATCACT TATTGAAGGT CAGCGGCGAA AAAGAGGTTG AGGTGGAGGA GCTGTACCGA
GAGCTCATGC CTCTTGTTAC GCAGTATGGG GTGGAGGGGA TAGTATCTGG CGCGGTCTCC
TCCTTGTATC AAAAAAGGCG CATCGACAAC GTGGCGAAAG CTCTGGGGAT TAGCCACATA
ACGCCTCTGT GGGGACGCGA CCACGTGGAG CTTCTGCGAG AGGAAGTTGC CAAGAGCCGC
TTTGTTATAA CTGCTACTAT GGCGCTGGGG CTGTCGGAGA AGCATCTGTG CGCCGTTGTT
GACGAAAATA TGGCGGAGGA GATAATAGCC CTGGCAAGGC GCTACGGCTT TTCGCCAGTG
GGAGAGGGAG GCGAGTACGA GAGCTACGTG GTGGAGAGTC CGCTGTTTGC GATTGACATA
GTAGCCGAGC CCCGGTGGCA CCCCAGCGGC TGGGGCGTAT GTGAGATAAA AGAGGCTAAG
ATCCGCAGAG GGCTGAGGGC TGGTTCGAGT TTTCCGGGAA AAACTAGGGG GAACTCGATG
TCAGCGCCGC GTTGA
 
Protein sequence
MKVCVLYTGG KDSHYALLKV LEAGHEVVCL ATAAPIREDS YMFHSVNVRW SLLHGEAMGL 
PHHLLKVSGE KEVEVEELYR ELMPLVTQYG VEGIVSGAVS SLYQKRRIDN VAKALGISHI
TPLWGRDHVE LLREEVAKSR FVITATMALG LSEKHLCAVV DENMAEEIIA LARRYGFSPV
GEGGEYESYV VESPLFAIDI VAEPRWHPSG WGVCEIKEAK IRRGLRAGSS FPGKTRGNSM
SAPR