Gene Pars_1002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1002 
Symbol 
ID5055448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp894484 
End bp895437 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content58% 
IMG OID640468559 
Productaldo/keto reductase 
Protein accessionYP_001153234 
Protein GI145591232 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.11413 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAGA TTAGGTTGGG CAGAACCGAT ATGCGTGTGT CGAGGATCGG CATGGGGGCT 
TGGCAGTTTT CCGGCGATGC GTGGGGGGTC TTTTCCTACG AGCAGGCAAA GGCCGTGGTG
ACCAAGGCGC TGGAGGTGGG GATAAACTTC TTCGACACCG CGGCGGTTTA CGGCAGGGGG
CGGAGTGAGG AGTTTCTCGG TAGGGCGATA AGGGAGTTGG GGGCTAGGGA CCAAGTCTAC
ATCGCCACGA AGATCCACGG CGATTGGCTG AGACGGGTGG ACATCCTCGC CTCTGTAGAG
AACCAGAGGA GAAGGCTCGG CGTTGACGCT ATTGACCTCT ACCAAGTTCA TTGGCCAGCC
TGCTGGCACA ACACGCCGAT TTGCGAGACT ATGAAGACGC TGGAGGAGCT AGTGGACAGG
GGGCTGGTGA GGTATATAGG CGTTAGCAAC TTCCCCCTGG CGCTTCTCGA ACACGCCAGG
TCGTGCCTCT CAAGGACGGA CATTGTAACC TCGCAGAACC GGTACAACCT AATCGAGCGG
GAGGCCGACA AGGAGCTTCT CCCCTACTTA AGAAGAGAGG ATATTGTGCT AATCGCCTGG
AGCCCCTTGG CGAAGGGCGT TCTCACGGGT AAGTACACTC CAGAGAACTT GCCGCAGTTT
GAAGACGTGA GACGGAACGA CCCCCTCTTT ACGCCGGGTA ATCTCAAGAC CGCGGCCCCG
GTGGTGGAGG AGTTGAAACG CGTAGCGGCT AAGTACGGGA AAACCCCGGC GCAGGCGGCG
CTGAACTGGC TTATCAGAGA CCCATGGATC TACCCAATCC CTGGCGCCAA GACGCCGGAA
CAGGTGACGG AGAACGCAGG CGCTGTTGGC TGGCTTATGT CAGACGACGA GTGGAGGACG
CTGGATAGGC TGGGCTGGGA CGCCTCCCAG AGAATTCTCT ACGTGACTTG GTAG
 
Protein sequence
MEKIRLGRTD MRVSRIGMGA WQFSGDAWGV FSYEQAKAVV TKALEVGINF FDTAAVYGRG 
RSEEFLGRAI RELGARDQVY IATKIHGDWL RRVDILASVE NQRRRLGVDA IDLYQVHWPA
CWHNTPICET MKTLEELVDR GLVRYIGVSN FPLALLEHAR SCLSRTDIVT SQNRYNLIER
EADKELLPYL RREDIVLIAW SPLAKGVLTG KYTPENLPQF EDVRRNDPLF TPGNLKTAAP
VVEELKRVAA KYGKTPAQAA LNWLIRDPWI YPIPGAKTPE QVTENAGAVG WLMSDDEWRT
LDRLGWDASQ RILYVTW