| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_1001 |
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| Symbol | |
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| ID | 5055450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | - |
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| Start bp | 893497 |
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| End bp | 894087 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640468558 |
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| Product | NADH-quinone oxidoreductase, B subunit |
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| Protein accession | YP_001153233 |
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| Protein GI | 145591231 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR01957] NADH-quinone oxidoreductase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.846644 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.110077 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATAAAC CCACCACATC TATGTCTCAG GCATTAAGAG AGTTTTTGTT AAAGAAGGCG
AAGCTGGAAA AGATCTTTAA CTGGGGAGTG AGGTGGTCGC TGTGGCCTGT CCACCTCGTC
ACGTCGTGTT GCGGAGTTGA AGTTGCCCAC ACCTCGGGCC CTGGGTTTGA CGCCGAGCGC
TGGGGCGTAT TGCCGTTTCA CACAATGAGG CAGTCAAATG TAATACTAGT AGAGGGCACA
ATTACTAGGA AAATGGCCAA AGTGTTGAAG ATGGTGTACG AGCAGATGCC GGAGCCTAAG
TTCGTACTTG CCATGGGGGC GTGTGCAGTG AGAGGAGGGC TTTTCTGGAA CTCCTACCAC
GTGGTGCAAG TCGACACAGT TGTCCCCGTA GATGTGTACA TTGCAGGTTG TCCGCCGACG
CCGGAGGCTG TGGTTAGGGC TTTCATAATG CTTCACAACA AGATAAAGGG CAAGCCCGGG
CCCTTTATAG AACCATCAAA GGTAGACTTA ACGCCGTACC TCCCGCCGCC GCCAAAACCT
GCCGCGCCTA GACCCGCCCC GCAACAGACA GCACAGCCCG CCTCTGGGTA A
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| Protein sequence | MDKPTTSMSQ ALREFLLKKA KLEKIFNWGV RWSLWPVHLV TSCCGVEVAH TSGPGFDAER
WGVLPFHTMR QSNVILVEGT ITRKMAKVLK MVYEQMPEPK FVLAMGACAV RGGLFWNSYH
VVQVDTVVPV DVYIAGCPPT PEAVVRAFIM LHNKIKGKPG PFIEPSKVDL TPYLPPPPKP
AAPRPAPQQT AQPASG
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