Gene Pars_0980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0980 
Symbol 
ID5054440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp870144 
End bp871439 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content49% 
IMG OID640468536 
Producthypothetical protein 
Protein accessionYP_001153212 
Protein GI145591210 
COG category[R] General function prediction only 
COG ID[COG2425] Uncharacterized protein containing a von Willebrand factor type A (vWA) domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000197684 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGCTCCC TCCTAAACGT AGACTACAAC GACGAGCTCA CAAGGCTGAG GGTACACGAA 
ATTGTAAAGT ACTTCCAGAG ACTTGGAGTA CCCATAAAAC TTTCGAAAAT ATCCAACGAC
ATAATTGCAG ACTCGTTCTA CGTCCACTAC AGGACGCCCA TTCTCAAAGA CGGCCCAGAC
AAACAAGAAG AGTCTCTGTG GCACGTATTT ATCAAGACCT ACACATCGTC GGACGTATAC
CACGAAATAT CTAAGATCAG CCGCTATAAC TACCAAGTAT CCAAATCAGC ATCTGTCAAG
TTGCTGAGAG CTTACAACAG CTTACTGTCT AGGATCGAAA GAGGCGCCGT AGAGGGCTTC
GAGGACCAGA AACAAGATTT TAGAGACCTC AGCGAGAACC AGCAACTGCG CAACGAGATA
AGCAACCTCC TCCGCTTCTA CATGGGCAAT GTGCGGAACA TAGAAAAGCT GAGGAAATCC
ATGACGAAGG CACTTGGAAA CGAGGTGGGC AAGGAGACTG CAGAGCTTCT GTTCGACATA
GACATAGACC CCTACAGGGC GAGACTGGCG AAAATTTTAG AATCCCTAGT AGAGATGCTC
TCCGCAGTCA AAGAAGAGGT CGACCAGGGA GATGTACAAG AACGGCGTGG GGTCATCTCC
GGCGTGACGC GGATAAGGAC ATACAGCGAT CTACAAAAAG CTACGAACCT AAGCAAGGCA
ATATACCTCC AGTCCAGGGA GCTCTTCGGC TACAAGCTCG CCACAAAGTC GCTTTCCATT
TACGACTTAG CTCTCGACAC AAGGGACAGG GTATACCTAC TGGTTGACAA GTCCGGGTCC
ATGTTCTACA GCCTATACGA CGGCGTAGCC ATGGACATGA CGCAGAAAAT AACCTGGGCA
ACCGCCTTGG CTATTGCCGT GATGAAGAAG AGCAAGAGGA CCGTATTGAG GTTTTTCGAC
CAGATGGTCT ACCCCCCCAT AACCAACGTG AAAGACATCA TCCGGTCGCT ACTCCGCGTC
CTACCCCTAG GCGGCACAGA CATCACAGCC GCCGTCCACA CAGCCGTCAG AGACGCAAAA
CAACAAAGCC TACACAACTA CAAGCTGGTA ATAATTACAG ACGGCGAAGA CGACATGATC
CACCCAGAAG TTCTAAAAAT GGCAAAGACA GCCTTCAGAG AAGTAAAGGC AGTGTTAGTG
GGCGGCACCA ATTCCGTGAT TGAGTCGTAT CTTCCAACAA TAAAAGTAAA TACAGCTAGT
CCAGAATCGC TGAAAACAGT CCTAAAGAAT ATTTAA
 
Protein sequence
MGSLLNVDYN DELTRLRVHE IVKYFQRLGV PIKLSKISND IIADSFYVHY RTPILKDGPD 
KQEESLWHVF IKTYTSSDVY HEISKISRYN YQVSKSASVK LLRAYNSLLS RIERGAVEGF
EDQKQDFRDL SENQQLRNEI SNLLRFYMGN VRNIEKLRKS MTKALGNEVG KETAELLFDI
DIDPYRARLA KILESLVEML SAVKEEVDQG DVQERRGVIS GVTRIRTYSD LQKATNLSKA
IYLQSRELFG YKLATKSLSI YDLALDTRDR VYLLVDKSGS MFYSLYDGVA MDMTQKITWA
TALAIAVMKK SKRTVLRFFD QMVYPPITNV KDIIRSLLRV LPLGGTDITA AVHTAVRDAK
QQSLHNYKLV IITDGEDDMI HPEVLKMAKT AFREVKAVLV GGTNSVIESY LPTIKVNTAS
PESLKTVLKN I