| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_0966 |
|---|
| Symbol | argC |
|---|
| ID | 5055468 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | + |
|---|
| Start bp | 858940 |
|---|
| End bp | 860001 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640468522 |
|---|
| Product | N-acetyl-gamma-glutamyl-phosphate reductase |
|---|
| Protein accession | YP_001153198 |
|---|
| Protein GI | 145591196 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0002] Acetylglutamate semialdehyde dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01850] N-acetyl-gamma-glutamyl-phosphate reductase, common form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.170153 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.000000021717 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACTTTGA GGACATGTAT AGTCGGGGCG TCGGGCTTTG TTGGCGGTGA GCTATTGCGC
ATTCTTCTCC AGCACAGCGG GGTCGAGGTG GTGTGCGCCA CGTCTAGGAA GTTTAAGGGG
GAGTACATCT ACAGGGTGCA CCCCCACTTG AGGGGGTTTA CCCAGCTTAA GTTCGTGGAG
CCCACTATCG ACGCTGCGCT TAAGGCAGAC GTGGTCTTCC TCGCTCTGCC CCACGGGGAG
TCTGTGAAGT GGGTGCCCAA GCTCTACGAG TCCGGAGTCG CCGTGTTTGA CCTTAGCGCC
GATTTTAGGC TAAAGGACCC CAACGCCTAC GTGGAGTGGT ACAAGTGGCC GCAGCCCCAT
CCCTACCCCG ACTTGTTGCA GAAGGCGGTG TACGGCCAGC CTGAGCTCCA CAGGAATGAG
CTGGTCGGCG CCAAGCTGGT GGCAGTCCCC GGTTGCATGG CCACAGCCTC TATCCTCATG
CTGGCCCCCC TAGCTAAGCA CGGCTTCCTC GGCAGGGCGC CTCCCGTGGT AGACGCCAAG
ATAGGGTCAA GCGGCGCCGG CGCCGAGGGG TCCATCGTCG ATCTCCACAG CTTCCGCACC
TACGTGGTTA GGCCCTACGA GCCTGTCCAC CACCGCCACA TCGCGGAGAT TGAGCAGGAG
CTTAGCCTAC TGGCTGGGAA GAAGATCAGG GTGGCCTTTA CCCCCCACGC CGTGGATTTG
GTGAGGGGAA TCTTCGCCAC CGGCCACACC TACGTGGAGA AGCTCCCCAC CGAGGCCGAC
ATGTGGAAGA TGTACCGCGC CCTCTTCGGC GACTCGAAGT TCATTAGGAT TGTGAAGGAC
AGGCTGGGGA TCGCCCGCTA CCCCAACACC AAGTATGTTA TAGGCTCAAA TTTCGTTGAC
ATCGGCTTCG AGCTAGACCC GAGGCTCAAC AGGGTAGTCA CCTTCGCCGC GATAGACAAC
CTCGTAAGGG GCGCCGCGGG ACAGGCGGTG CAAGCCTTCA ACGTGGCCTT TGGCTTCCCC
GAAGACGAGG GCCTGAGATA CATCCCGCTG GCTCCGGTAT GA
|
|---|
| Protein sequence | MTLRTCIVGA SGFVGGELLR ILLQHSGVEV VCATSRKFKG EYIYRVHPHL RGFTQLKFVE
PTIDAALKAD VVFLALPHGE SVKWVPKLYE SGVAVFDLSA DFRLKDPNAY VEWYKWPQPH
PYPDLLQKAV YGQPELHRNE LVGAKLVAVP GCMATASILM LAPLAKHGFL GRAPPVVDAK
IGSSGAGAEG SIVDLHSFRT YVVRPYEPVH HRHIAEIEQE LSLLAGKKIR VAFTPHAVDL
VRGIFATGHT YVEKLPTEAD MWKMYRALFG DSKFIRIVKD RLGIARYPNT KYVIGSNFVD
IGFELDPRLN RVVTFAAIDN LVRGAAGQAV QAFNVAFGFP EDEGLRYIPL APV
|
|---|
| |