Gene Pars_0953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0953 
Symbol 
ID5055288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp842589 
End bp843443 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content55% 
IMG OID640468509 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001153185 
Protein GI145591183 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.32337 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGTCGA TAAAGTTTCC CAAACCCGAC GAGGGATACG CTGTTTTGGT CGACCTCGAC 
AAGTGTATAG GTTGCAGGGC ATGCCAGCTT GCATGTAAGG ACTGGAACGG GAGACCCGCC
GAGAAGACAG TGTTCACGGG CACCTTGACG TCGCCGAAGT CTCTGACCGC AGATGATTGG
AAGGTCGTCT TCTATTACGA GGGCGCCACG ACTAAGAAGT TGCTTACCCC CGCCGGCGAG
GTGGCCTTCA GCCAATTCGA CATGGCGTTT CTCCCCTACA ACTGCCTCCA CTGTGTCGCT
GCGCCGTGTG CCCGGGCTTG TCCAGTCGGC GCAATTAAGG TTACTGGTGA AGGCGCAGTT
GTCATAAATA GGGACGAGTG TATAGGCTGC GGCTACTGCG AAACGGCTTG TCCATACGAC
GTGCCGAAAC GGGGCTCAGA TGGGAGGTAT TACAAGTGCA CCTTCTGTGT TGACAGGATA
CAGAACGGCA AGTTGCCAGC CTGCGTAGAG GTGTGTCCCA CCAACGTCTT CACCTTCGGG
CCTGCAAAAG ACGTCATGGA GCTTGCAAAG AAGGAGCAGG AGAGGGGTAG AGTTGTCTAT
GGCCTAGAGG CGAGCTCGTA CGTAGGAGGA AGCGTTAGGT GGATATATGT GACCTCTGAG
CGTAGGAGCT TTGCCGTTAA GCAACACTTC GCAGATAAGA CCCCGCGCAA CGCACAAGAA
ATACGCGAGT TGTTAAAGCC TGTTACGATC TACGGCGGCG TTGCGCTAGC CGCTTCGCTC
GCGGTGCTGG GGCTAGCCGC CTGGCGCCGT TATAGGACAG AGGAAAAGAA AACCAAACTA
GAAAAGGGGT CCTGA
 
Protein sequence
MVSIKFPKPD EGYAVLVDLD KCIGCRACQL ACKDWNGRPA EKTVFTGTLT SPKSLTADDW 
KVVFYYEGAT TKKLLTPAGE VAFSQFDMAF LPYNCLHCVA APCARACPVG AIKVTGEGAV
VINRDECIGC GYCETACPYD VPKRGSDGRY YKCTFCVDRI QNGKLPACVE VCPTNVFTFG
PAKDVMELAK KEQERGRVVY GLEASSYVGG SVRWIYVTSE RRSFAVKQHF ADKTPRNAQE
IRELLKPVTI YGGVALAASL AVLGLAAWRR YRTEEKKTKL EKGS