| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_0950 |
|---|
| Symbol | |
|---|
| ID | 5054359 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | + |
|---|
| Start bp | 840763 |
|---|
| End bp | 841263 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640468506 |
|---|
| Product | PaREP1 domain-containing protein |
|---|
| Protein accession | YP_001153182 |
|---|
| Protein GI | 145591180 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.96504 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.692047 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTATGAGC AGAGTTATGT ACCTCCTTGG CGGGACTTGG AGACGTACGT GAAGACTAGG
CTCGAAGAGG CCGTTGCGGA GGCAGAATTG GCATCGAAGT TTCTAGGGCA AGGCCTATAC
CGGAATGCTG CTGGGAAGGT ATTTCAGGCG TGGAAAGCCC TACTGGCCGC GGCGGCTGCC
AAGAATAGAG ACCTCGTCCA CAAGCGGTTT CCCGGCGTTG TTAAAGACAG GACTCAGAAA
AGGAGGTCTA GGGCTGACAT GATCATAGCT CTTATGCCTA CAAACAGGCT TAGAGAGGTA
GCCAGTCTGC TAGTTGAAGT TTTTGGATGG GAGGTGTTGT ACCTAACTGA AATCGCTTTA
AGCCTCCACG AGTTCCAGTA CAACGGTCTT GACAAAGAGG GTATTGTTAG CCGCTACACC
AACCTGCAAG ACGTCGAGAG AGACATCCAC CACCTAGTTG AGAAAACAAG ACAGTGGGCG
AAAATAATAA GTCAGAACTA A
|
|---|
| Protein sequence | MYEQSYVPPW RDLETYVKTR LEEAVAEAEL ASKFLGQGLY RNAAGKVFQA WKALLAAAAA
KNRDLVHKRF PGVVKDRTQK RRSRADMIIA LMPTNRLREV ASLLVEVFGW EVLYLTEIAL
SLHEFQYNGL DKEGIVSRYT NLQDVERDIH HLVEKTRQWA KIISQN
|
|---|
| |