Gene Pars_0949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0949 
Symbol 
ID5056313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp839794 
End bp840717 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content53% 
IMG OID640468505 
Producthomoserine dehydrogenase 
Protein accessionYP_001153181 
Protein GI145591179 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0460] Homoserine dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.949052 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATATTGC TGTTTGGCTT TGGTGGTGTT GGCCGCACAT ATGCGGAGCT TCTTTATCAG 
AGAACCGGCT TGAGGCTCTG CGCGGTCTTC GACAGCGGAG GCGGCGTTGT GAAGAAGGAA
GGCTTCACGT GGGAAGAGGT GAAGGAGCTT TTAAAGGCGC CTAGGGGGGC GGTGTCAAGA
AGCGGAGTGG GGAGGCCTAC GTCGGTAGAG GAGGCTCTTG ACTTCTGCCA GGTGTTGGTG
GACGTGTCGC CGCCTAACTA CGACACGGCG GAGCCCTCCC TCTCCCTCTT CAAGAAGGCC
CTAGCAAAGG GCATGGCCGT AGTCACAGCC AACAAGGCCC CCCTAGCCCT CGCCTTCCAC
GAGGTGCAGA GCAGGCGGCT ATTTTACAAG GCTACTGTCA TGGCGGGGAC CCCCCTAATA
GACCTCCTCC AAGGGCTCCA CCCCCAGGAG GTGTTAAGGG TCAGGGGGAT TATTAACGGT
AGCACGAACT ACATATTGAC CCGGGTATAC AAAGATGGTA TCCCGTTTGA CCAAGCAGTA
AGGGAGGCTA GAGAAATGGG CATACTAGAA CCTGATCCAC GCCTAGACCT AGAAGGGCTT
GATCCAGCAG CAAAACTTGT AATAATTGCA AACACCCTGG GCAAGCGGAT AACTCTTGGC
CAGGTTGAAA GAGAGACGCT GTCGTTGAAG GGCTCTGTGA CTAGGTACAT CGCGTCGCTA
GAGTTGAAAA CTGGGAAGGC TGAGGTGAGG CCAATATCTC TTCCTGTGGA TGACCCCATA
CATGTAGACT ATACATTAAA CTCTGTGGAA ATAGTCACAG AGGTAAATAT AATATATGTA
AAGGGCAAGG GGGCTGGCAG AAAAGAAACA GCCATGGCGT TGCTAAACGA CACCCTCAAA
GCACAAGATC ATTTACGGCA ATAA
 
Protein sequence
MILLFGFGGV GRTYAELLYQ RTGLRLCAVF DSGGGVVKKE GFTWEEVKEL LKAPRGAVSR 
SGVGRPTSVE EALDFCQVLV DVSPPNYDTA EPSLSLFKKA LAKGMAVVTA NKAPLALAFH
EVQSRRLFYK ATVMAGTPLI DLLQGLHPQE VLRVRGIING STNYILTRVY KDGIPFDQAV
REAREMGILE PDPRLDLEGL DPAAKLVIIA NTLGKRITLG QVERETLSLK GSVTRYIASL
ELKTGKAEVR PISLPVDDPI HVDYTLNSVE IVTEVNIIYV KGKGAGRKET AMALLNDTLK
AQDHLRQ