Gene Pars_0931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0931 
Symbol 
ID5054502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp824614 
End bp825225 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content59% 
IMG OID640468487 
ProductABC transporter related 
Protein accessionYP_001153163 
Protein GI145591161 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0622684 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATAAAT TTAATCTTGT CTCGTTTGGT AGATCTGTGA TTGAGGTTGT CGACGTGTGG 
AAGCGGCTGG GCGGCGCGTG GATTTTGAGG GGAGTCAGCC TAAGGGTTAA CAGCGTGGTG
ACGCTTGTGG GGCCCAACGG CTCGGGTAAG ACAACCCTTG TGAAGATCAT CGCCGGGGTT
CTTGAGCCAA CGAGGGGAGT TGTCCAAGTA GATGGGAGGA GGCCCAAAGT CCCGGCGTCT
CTCCTCGGCG TGGTTTTCCA CACGCCTATG CTCTACCCCG AGCTCACTGT GCGGGAGAAC
TTGAAGCTCT TCTCTAAGCT GGCCGGCGGG AGGCTGGAGG GTTGCCCCCT TGGCGTCTGC
AAGGTGTTGG ACAAGCCCGT TAAGGCGCTT TCCTTTGGCT GGAAGAGAAG GGTAGATGTG
GTGCGGGCGC TTCTGCCAGA CCCGCCTAAC CTCGTCATTG ACGAGCCGAC TACTGGGCTG
GATGAGGAGG CTAGGGGGGA GCTCCTCGAC ATCTTGCGCA GCAGAGGGGC GGCCCTATTG
ACTTCGCCGT TTAGCCTAGG GGTTGGGCAA GAGCTCCGGA TTGAGGAGGT TCAACATGTG
GGGGGTAGTT AG
 
Protein sequence
MDKFNLVSFG RSVIEVVDVW KRLGGAWILR GVSLRVNSVV TLVGPNGSGK TTLVKIIAGV 
LEPTRGVVQV DGRRPKVPAS LLGVVFHTPM LYPELTVREN LKLFSKLAGG RLEGCPLGVC
KVLDKPVKAL SFGWKRRVDV VRALLPDPPN LVIDEPTTGL DEEARGELLD ILRSRGAALL
TSPFSLGVGQ ELRIEEVQHV GGS