Gene Pars_0918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0918 
Symbol 
ID5054684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp812725 
End bp813078 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content49% 
IMG OID640468475 
ProductHEPN domain-containing protein 
Protein accessionYP_001153151 
Protein GI145591149 
COG category[S] Function unknown 
COG ID[COG2250] Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTTCA AGTGGCTTGA GCGCCACGTT AGACATTTCC AAGAGGCTTT GAGAGGGCTA 
GAGCGTGGCG ATGGCTACTG GACTTGTTAC AACGCCTACA TCTCCGTGAG GGCGTTGCTA
ATGGGCGTGT TAGGATTCGA CCCATATAAA GACGTCACGA CAGTAGCAAC GCTCACAGCT
CTTGTAAAAA AGGCACTACC CAACGCCCCA GGCGACGTTA TAGACTGTGC AAAGTGTCTT
GAAAAAAGGC TCTCCGAGCC TTTAGGAGAC AGGTGTGTAA AATGTGCTGA CAAAATAGTG
GAGTACATAA AGACCTTGCC GCTTTCTCCA GCGACAAAAA TTGCCGATTT GTGA
 
Protein sequence
MHFKWLERHV RHFQEALRGL ERGDGYWTCY NAYISVRALL MGVLGFDPYK DVTTVATLTA 
LVKKALPNAP GDVIDCAKCL EKRLSEPLGD RCVKCADKIV EYIKTLPLSP ATKIADL