| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_0905 |
|---|
| Symbol | |
|---|
| ID | 5055120 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | - |
|---|
| Start bp | 802228 |
|---|
| End bp | 803223 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640468462 |
|---|
| Product | radical SAM domain-containing protein |
|---|
| Protein accession | YP_001153138 |
|---|
| Protein GI | 145591136 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.54943 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTTGTGA TTAACGTCTT CCAAGTGGGT GTCTCCACGA CGTGTAATGG GCGTTGTGTC
TACTGTCCGC TTACTATTTA CCGCGACAAG TGGGTGGGGA GGTTTATGGA ATTCTCTCTT
TTTCAACGCG TGGTAGAAGA GGGAGTGGGG GCGGGGGTTA AATATGTTCA CTTACAAGGC
TGGGGCGAGC CCTTGTTACA TCCCCAGTTT TTGGAAATGT TGATGCTTGC GCGTCGCCAC
TTTTCTGTAG GGTTTACCAC AAACGGGGTT TTATTAGCAG GGAGTTTAGC AAAGGGGATA
GTTAAAATCG GCGTTGATAT TTTAGCTGTC ACATTTGCAG GTACCAGGGC CGAGACACAC
AATAGATATA GACCAGGTAA TGACTTTAAT ACAATTTTAC AAAACTTGCG CAGGTTGGCG
CCTCTGTTAA AAGCCTCGGG GACGAGGATA GTGGCGATAT ATATGATGCT GGGAGATACC
TATAGAGAAC TCCCTTTCTT TGTCAAATTG GCAGCCGAGC TCGGCGTAGA CGAAGTTAGG
CTTAGCAACT TGTCGTACCT GCCGCACCCC AGCCTCTGGC TGTTGAAAGT CTTTTCTAAA
ATATTTGAAC CAGAGCCTCC CCACGTATTG GCGACAATAA GAGAGGCAAA AGAGGTGGCT
GAGAAGAGCG GCGTAAAGCT GAGCCACAGG CGGTTCTCGC CTTGGGAACA CCTAGAATGT
CCAGAGGCAC CAACTTCAAC TCTATACATT GACGCCGACG GCGAGGTGTA TCCCTGTGTC
TACCTAAGCC TGCCTGACTA CGCCCAGAGG TGTTTTGAAG AAAAGTGCAA GAAAAATCCC
CGGCTCTCTT TTGGCAACAT TAGAGAGGGA ATTAGAGCCA TTTTAAAAAG ACGTAGAGAA
TTTGTCGGTA TATTTGAAGC GAGAAAAAAA TCGGATTTTA TCCCCCCGGA CCCGCCGGAG
CCGTGTAAAA AATGTTATAG ACTTTACTGG ATTTAG
|
|---|
| Protein sequence | MFVINVFQVG VSTTCNGRCV YCPLTIYRDK WVGRFMEFSL FQRVVEEGVG AGVKYVHLQG
WGEPLLHPQF LEMLMLARRH FSVGFTTNGV LLAGSLAKGI VKIGVDILAV TFAGTRAETH
NRYRPGNDFN TILQNLRRLA PLLKASGTRI VAIYMMLGDT YRELPFFVKL AAELGVDEVR
LSNLSYLPHP SLWLLKVFSK IFEPEPPHVL ATIREAKEVA EKSGVKLSHR RFSPWEHLEC
PEAPTSTLYI DADGEVYPCV YLSLPDYAQR CFEEKCKKNP RLSFGNIREG IRAILKRRRE
FVGIFEARKK SDFIPPDPPE PCKKCYRLYW I
|
|---|
| |