Gene Pars_0879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0879 
Symbol 
ID5054193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp779128 
End bp781659 
Gene Length2532 bp 
Protein Length843 aa 
Translation table11 
GC content50% 
IMG OID640468439 
Producthypothetical protein 
Protein accessionYP_001153116 
Protein GI145591114 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTAGGT GGGTGCTTCT ATTATTCCTG TTACTGGCTT ATCTGACATA CCAACAAAAC 
ACAACGCAGG TGTTAGGCCC ACAACTAAAC TGGGTAATAG AGTCGAACCC ATCAAATGGA
ACAGATAGGG CTAATAGTAT ATGTATGAGT GAGAAGTTCC TATATGTTGT TGGCTCCGAC
TACTCTTTGA ACAGATCCAG GTGGCGAATA GAAATGAGAG AAAAGATAAG TGGAAAACTA
AATAAAATTT GGACATATAA CATCAGCGAT GGTTATGGCG AACTAACAGA TTGCATCATA
ATAGACGATA AACTATACGT CGTTGGATAT GAAAAAGAAA AATCAAACAC CCAAGGGGTA
ATATTAATTT TCAACGTCAA CTTAAACTTA TTAAAAATCG AAAAAGCTTT AAATATTGAT
ATTCCACAAA AAATAACAAC AGATAATAAA TATCTTTATA TTATCGGAAT TGGTCCTCAC
TATATACGCT ATGGAAATAT TACAATAGTC ATTAGTGCAT GGCACATAGA AAAGAGAGCG
TTAGACTTGT CGTTGATCAA AAATAGGACA GTAACTCTGG GGATCCCACT AGGCATAGCT
ATTAATCCAG TCACTGGTCA TATATGGACG TATGGAATAG AATACTTCTT TAAAATACCA
TTAATTATTA TTCTTAATGA AAATTTTACT CAAATTAAAT CATCTTCTTT AGATATTGCG
CCATTAGGTA TTACTTTTGA TTACGAGGGA AATGGATATC TATTTGGTAT AGGGGGTATA
GTAAAAACAG ATAAGGAAGG TAGAACTTTA ACTTCTAGAG AATTGCCTAG ATCTTATGGG
TATAGGTATT CTCCACTAGC TGGTGTCTTT GTAAAAGGAA AATTGTATAC CACCATATAT
AGCTATCTTT CTATATGGGA TCCTGTAAAT TTGGTAATTC TTAAGAATAT GACTTTATTT
ACAAATATAT CTGACATAGA TTTTATATGG AAAATTGTTC CGGATAAATA TGGCTTATAC
ATTGTTACGT CTGTTAATAA ATCTGGCGAT TATAGATGGC TCATCGCTTT CGTGTCTTTA
CCTGTAAATG TGAAAGTGTT AGTAAAAGAC AGTTTTAATA ATACCAAAGA TTTCCTGTTT
CAACTACTAA ATGAAACAGG TTTTGTCGTG GGGGCTGGTA ACAGTAGTAA AAACTTCACG
CTATTCAGCG GAAAAAGGTA TATTGTGAAA GTGAAGGCCT TCGGCACCGA ACTCACCAGC
AACTTCACAG CCACAGATGG GCTAAACGTT GTTGTCGTAG TTCCCACGAC AAAGGTGCGG
GTAAGGGCTG TCGACGGCTT CGGCCTTCCA AGAAGTTGGC CGGTGGAGCT TATCGGCGTG
GCTAAGGGCA ATGGGACTAT CGGACCGGTT GAGGTTTTGG GAAATGGGAC ATATACGGCG
AGGGTGTTAG CGTTTGGGCG GTGGTTCAAC TCGACCTTCT TCGCGGTGCC CGGCAAGGTA
CAGAACGTCT CCGTGGTAGT CCCGACCGCC CTTTTGACGG TGCGCGCTGT TGACGGCTTC
GGCAGGCAGA GGGACTGGCC AGTGGAAGTT GTCGGCGTCT CGCGGGGGAG CGGCGTAGTG
GGGCCGGTTG AGGTGCTCGC CGGCACCTAC ACGGCGAGGG TCTCGGCGCT GGGCGCTGTG
TTTAACAAGA CGGTGGAGGT GCGGCCGGGG GAGAACGCCA CGGCCGCCGT CCAAGTCCCC
ACCGCCCTGC TGTCTGCGGC GGTTGTTGAC GGTTTTGGGA GCCGGAGAGA TTGGCCTCTG
GAGATAAGAG GGGTGGCAGG AGGGAGGGGC TCTGTAGGCC CTGTGGAGGT GCTTGGGGGC
CGCCGATACG TAGTCGCCGC CGCGGCATTT GGCAAGAATT TCACGGAGGT GGTCGACCTG
GCCCCCGGCG CCAACGCCAC GGTGGTCGTG AGGGTCCCCA CCGCAAAGGT CGCGGCCAAG
GTGGTGGACA GCTTCGGCAG GCAGAGGGAC TGGCCCGTGG AAATCGTCGG CGTGGCCTCG
GGGAGGGGCG GAGTAGAGCC AGTCGAGGTG TTGGCCGGGC GCTACGTGGC GAGGGCGTCC
GCGTTCGGTA GGGAGTTCGC CGTGGAGCTC GCCGCGGAGC CCGGAAAAGT CGCCGAGGCC
GTGGTGCAGG TGCCGACTGC TGTGCTAAAT ATCGTAGTCC TTGACGACGA CAAGAAGCCG
CTGGACAGGT ACGTGGAGTA CGTGGCGGTT GGCGGCAACT CCTCCTCCAA GCCGCCGAGG
GAGCTGGAGC TACTCGCCGG GAGGTACACC ATAAGGGCCC GCGACCTGGG CAAAGAGACG
TCGTCAGAAG TCGAGCTCGG CCCCGGAGAG GTCAAGACCG TGGAGCTGAT AATTCCCGGC
ACGGCCGGCT TCGACGTCGG GGGCACCCGC GTAACTTACT CCACGGCCGC GGCCCTAGTC
GCCGTAGCCC TAGCCGCAGT CGCCGGCGTT GTAGCTCTGG CGCTAAGGCG GCGGAGGAGA
CAAGCCAAGT AG
 
Protein sequence
MGRWVLLLFL LLAYLTYQQN TTQVLGPQLN WVIESNPSNG TDRANSICMS EKFLYVVGSD 
YSLNRSRWRI EMREKISGKL NKIWTYNISD GYGELTDCII IDDKLYVVGY EKEKSNTQGV
ILIFNVNLNL LKIEKALNID IPQKITTDNK YLYIIGIGPH YIRYGNITIV ISAWHIEKRA
LDLSLIKNRT VTLGIPLGIA INPVTGHIWT YGIEYFFKIP LIIILNENFT QIKSSSLDIA
PLGITFDYEG NGYLFGIGGI VKTDKEGRTL TSRELPRSYG YRYSPLAGVF VKGKLYTTIY
SYLSIWDPVN LVILKNMTLF TNISDIDFIW KIVPDKYGLY IVTSVNKSGD YRWLIAFVSL
PVNVKVLVKD SFNNTKDFLF QLLNETGFVV GAGNSSKNFT LFSGKRYIVK VKAFGTELTS
NFTATDGLNV VVVVPTTKVR VRAVDGFGLP RSWPVELIGV AKGNGTIGPV EVLGNGTYTA
RVLAFGRWFN STFFAVPGKV QNVSVVVPTA LLTVRAVDGF GRQRDWPVEV VGVSRGSGVV
GPVEVLAGTY TARVSALGAV FNKTVEVRPG ENATAAVQVP TALLSAAVVD GFGSRRDWPL
EIRGVAGGRG SVGPVEVLGG RRYVVAAAAF GKNFTEVVDL APGANATVVV RVPTAKVAAK
VVDSFGRQRD WPVEIVGVAS GRGGVEPVEV LAGRYVARAS AFGREFAVEL AAEPGKVAEA
VVQVPTAVLN IVVLDDDKKP LDRYVEYVAV GGNSSSKPPR ELELLAGRYT IRARDLGKET
SSEVELGPGE VKTVELIIPG TAGFDVGGTR VTYSTAAALV AVALAAVAGV VALALRRRRR
QAK