| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_0820 |
|---|
| Symbol | |
|---|
| ID | 5054058 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | + |
|---|
| Start bp | 730422 |
|---|
| End bp | 730814 |
|---|
| Gene Length | 393 bp |
|---|
| Protein Length | 130 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640468381 |
|---|
| Product | HEPN domain-containing protein |
|---|
| Protein accession | YP_001153058 |
|---|
| Protein GI | 145591056 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2250] Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.288763 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGTTA AGGTGGCTGA GCGCTGGCTC GATAAGGCGA GGAAGTTTAG AGACTACGCT
AAGGAGGATT TGGCAATCGG TAGATTCGAC TCCGCCGCCT TTTTTGCGCA GCAAGCTGTT
GAGCTGTTGC TAAAAGGCGT GCTCATAAAG CTGGGCGGAT CTCGCCCCCT TACACACTCG
GTGGCCGAGT TGTTGCAGTA CTTGGCGGAA CTAGCTGGCA GGGAGGCGCC TCCCGACGTG
GTTAGATGCG CCGAGGCGCT TGAACAACAC TACGTCCAAG CCCGCTACCC CGACGCTAGG
ATAAACGATT ACAGGAAGTG GGAGGCGGAG GAGGCCGTTA AATGTATGGA GGTGGTGTGG
GGGTATGTAC GAGAAGTGGC TGAGGGCGCT TAG
|
|---|
| Protein sequence | MLVKVAERWL DKARKFRDYA KEDLAIGRFD SAAFFAQQAV ELLLKGVLIK LGGSRPLTHS
VAELLQYLAE LAGREAPPDV VRCAEALEQH YVQARYPDAR INDYRKWEAE EAVKCMEVVW
GYVREVAEGA
|
|---|
| |