Gene Pars_0815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0815 
Symbol 
ID5055447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp725472 
End bp726104 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content62% 
IMG OID640468376 
Producthypothetical protein 
Protein accessionYP_001153053 
Protein GI145591051 
COG category[H] Coenzyme transport and metabolism
[K] Transcription 
COG ID[COG1339] Transcriptional regulator of a riboflavin/FAD biosynthetic operon 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.392356 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTGCC GGGAGAGGCG TCTAGCCGCC GACCTCATTG CCCTGTCCTC GGTGGAGGGG 
CTTCCGGTGT CGGAGGCGGC GAAGAGGCTA TGCATGACGC GGCAGGGGCT CTACAAGCTT
TTAAAACAGC TCAGGGCCGA GGGCTACGTA GCTGAGGGGT CTGTGGTTAA GCTTACGCCT
AAGGGGAGGG ACTTCCTCAG CGGGATACTG AGGGATCTGC TCCGCTACTT CAACATCGCC
TCCATCCGGC TAGTCGGGAG GGTGGTGAGC GGGCTGGGGG AGGGGGCCTT CTACATATCC
CTGGAGGGCT ACAAAAGAGC CATTGAGGAG AGGTTGGGCT TCACGCCGTT TCCCGGTACG
CTGAATATCA AGCTTGACCC GCAGTACATG CCGTACCGCC GCTACTTAGA CGGACTTCCG
GGAGTTGTGA TTCCGGGCTT TTCCAACGGC CTCAGGACCT ACGGCGCGGT TAAGGCCTTT
AGGGCTAGGG TGAACGGGGT GGAGGGTGCC GTGGTGATGC CTGAGAGGAC CCACCACCCC
ACCGACGTGA TTGAGGTGGT CGCCCCAGTG AAGCTCCGCG ACGCTCTGGG TCTGAGAGAC
GGCGACGTCG TCGAGGTGGA GGTGCTGTTG TAG
 
Protein sequence
MECRERRLAA DLIALSSVEG LPVSEAAKRL CMTRQGLYKL LKQLRAEGYV AEGSVVKLTP 
KGRDFLSGIL RDLLRYFNIA SIRLVGRVVS GLGEGAFYIS LEGYKRAIEE RLGFTPFPGT
LNIKLDPQYM PYRRYLDGLP GVVIPGFSNG LRTYGAVKAF RARVNGVEGA VVMPERTHHP
TDVIEVVAPV KLRDALGLRD GDVVEVEVLL