| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_0806 |
|---|
| Symbol | |
|---|
| ID | 5055579 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | + |
|---|
| Start bp | 718146 |
|---|
| End bp | 718751 |
|---|
| Gene Length | 606 bp |
|---|
| Protein Length | 201 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640468367 |
|---|
| Product | transcription factor |
|---|
| Protein accession | YP_001153044 |
|---|
| Protein GI | 145591042 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2101] TATA-box binding protein (TBP), component of TFIID and TFIIIB |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTACCA CAGGGCCGAC GTATCGTATT GAGAACATCG TAGCCACGGT CAACTTGCAG
GTTGAACTTG ACTTAGAAAT GCTGGCCGAG AGGCTGGCGA TGGCCGAGTA CAACCCCGAC
CAGTTCCCCG GCCTCATCCT CCGCCTCACG AAGCCCAGGA TTTCTGCCCT TATTTTTAGG
ACGGGCAAGA TGGTGGCCAC GGGGGCGAAG AACGAGGAGG ATCTCAAAAA CGCGGTGCGG
GCGCTGGTCA AATTGCTCAA GGACCATGGG GCGGATGTGC CCTTTGACCC GGAGGTCCAA
GTCCAAAACA TCGTTGCTTC GGGGAACCTC CATGCCGAGG TCGACCTAGA GCAGGCAGTG
CTGATGTTAG AGAACGCTAT GTACGAGCCG GAGCAATTTC CCGGATTGAT ATACCGTATG
ACGAACCCCA GGGTCGTGAT TCTAATATTC GGCTCTGGGA AGATCGTCTG TACCGGGGCC
AAGAGCGAGC GGGACGTGGC CACGGCGGTG CAGAAGCTCT ACAACCAGCT AAAAGAACTT
GGTGTGCTCT ACGTGGAGGA GGGGGCGGAG GAAGAGGAGT CAGAAGAGGA GCTCGAAGAG
TTGTGA
|
|---|
| Protein sequence | MSTTGPTYRI ENIVATVNLQ VELDLEMLAE RLAMAEYNPD QFPGLILRLT KPRISALIFR
TGKMVATGAK NEEDLKNAVR ALVKLLKDHG ADVPFDPEVQ VQNIVASGNL HAEVDLEQAV
LMLENAMYEP EQFPGLIYRM TNPRVVILIF GSGKIVCTGA KSERDVATAV QKLYNQLKEL
GVLYVEEGAE EEESEEELEE L
|
|---|
| |