Gene Pars_0785 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0785 
Symbol 
ID5055817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp700963 
End bp701649 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content41% 
IMG OID640468344 
Producthypothetical protein 
Protein accessionYP_001153023 
Protein GI145591021 
COG category[S] Function unknown 
COG ID[COG4920] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCGGG TGGTAATAAG CGTCTTGTCA ATACTTGTAT TCTCGGCAGT CCTTGCCCTA 
TTCCCACAGT TCTACTTACA GGCGTTAATT CTCTACTTCA TCGTGTTTTT CGGAATAGCC
ATATTCGCAG GTCTGCGGTC TTACAGGAAA AACTTGGCGT CTGCGCAAGA AATTGCGAAG
GGGCGTCCAC TGCTGGAGAT AGATGAAAAA GATATAAATA AGACATTGGA AAAAGATAAG
GAGCTTCTTA ATGAATATAA AAATCTGGCT AGAAAGTCGT TTATTAATTT TATGATACTA
CCACTGTCCC TATTCGTCGC CATGGTTTTA TTCCCCGTCC TACCTCCGTT TATAGAGGCG
TCTCTTAAGC CGTATATAGG ACCAGAGGCA GGTAGGTTTC TGGGGTACGT GGCTATTTTC
AGCATATTCG CCGCCATAAC AACGGCGATG TTTAGACCAA TTACAACCCC CAAGATTGTT
AGACATCTTA AAGTCTACGA GACGGGAATT GTCGTAGACA AGAGCCTTGG GCTGAAGGCG
CCCATTGAGG TAACCGACTA CCGACTAAAC GAAAACAGAA AATTTATAGA ATTTAAGACC
AATAACCAGA TTTTTAGGAT TTATTACAAA GATGTAAAAG AACTGGATAA CATTTTATCG
AGACTTATAA AGCCGCTAAA ACAGTGA
 
Protein sequence
MRRVVISVLS ILVFSAVLAL FPQFYLQALI LYFIVFFGIA IFAGLRSYRK NLASAQEIAK 
GRPLLEIDEK DINKTLEKDK ELLNEYKNLA RKSFINFMIL PLSLFVAMVL FPVLPPFIEA
SLKPYIGPEA GRFLGYVAIF SIFAAITTAM FRPITTPKIV RHLKVYETGI VVDKSLGLKA
PIEVTDYRLN ENRKFIEFKT NNQIFRIYYK DVKELDNILS RLIKPLKQ