Gene Pars_0784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0784 
Symbolrpl12p 
ID5056363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp700645 
End bp700974 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content60% 
IMG OID640468343 
Product50S ribosomal protein L12P 
Protein accessionYP_001153022 
Protein GI145591020 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2058] Ribosomal protein L12E/L44/L45/RPP1/RPP2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTACA TATACGGCGC CCTGTTGTTG CACTACGCAA AACAGGAGAT AAACGAGGAG 
AACTTGGCAA AGGTGTTGCA AGCCGCCGGC ATCTCGCCTG ACGAGGTTAG GATAAAGACG
CTGGTCGCAG CGCTGAAGGA GGTAAACATA GAGGAGGCAA TTAAGTCCGC GGCCTTCGCC
CCCGTGGCGG CCGCGCCGGT AGCCGCGCCA GCAGCTGCCG CGTCTACTGC CGCTGCTGCT
CAGGCACCTG CCGCGGAGAA GAAAGAGGAG GAGGAGAAGA AGGGGCCAAG CGAGGAGGAA
ATCGCCGGTT CGCTGGCTTC ACTGTTTTAG
 
Protein sequence
MEYIYGALLL HYAKQEINEE NLAKVLQAAG ISPDEVRIKT LVAALKEVNI EEAIKSAAFA 
PVAAAPVAAP AAAASTAAAA QAPAAEKKEE EEKKGPSEEE IAGSLASLF