Gene Pars_0772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0772 
Symbol 
ID5054253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp689013 
End bp689663 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content61% 
IMG OID640468331 
ProductERCC4 domain-containing protein 
Protein accessionYP_001153010 
Protein GI145591008 
COG category[L] Replication, recombination and repair 
COG ID[COG1948] ERCC4-type nuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAATTCA TCGTCCTTGT AGACACTAGG GAGCACGCCC AGGAGGTAGT TAGGCACATC 
AAGGAGGCAG GGTGCAGGGT CCTCAAGACT AAGCTGGAGG CCGGCGACTA CGTAGCCGGC
GAGTACGTCT TTGAGCGGAA GAGCGTAGAC GACTTCGTCA ACTCGGTGAT AGAGGGGAGG
GTCTTCGAGC AGGCCGAGAG GCTCAAGTCC TCCGGGCTGA AGCCCGTCGT CGTGGTGGAG
GGCGACCTCT GGAGGGAGCT TAGATATAGG AGAATTTCGC CAAACGCCGT GCTCGGGGCG
TTGCTCGCCC TAAGCTCCAT GGGCGTCGGG CTGGTCTACA CAGAGGACAA AGCCCAGACA
GGCGTGCTGG TCTGCCTCGC GGCGAGGCGG GCGAAGAAGG CGGCGAAGGC CCCCGCCCCG
AAGAAGAAGG AGGCCGACGT GAGGAGCCTC CAGATAGCCC TCCTAGCCTC CCTCCCCGGC
ATTGGGCCGA GGCGCGCCGA GGAGTTGTTG AAGAAGTACG GCACGCCGCT AAACGCGTTG
CTCAACTACA AGTCGTGGGA GGTAGATAGC AAAAGCCACA CCTTAATAAA GAGGGTGTTG
GAAACCCCCT TCGACGCCAG CAACACGCTA GACGACTACC TAGGCCCCTA A
 
Protein sequence
MEFIVLVDTR EHAQEVVRHI KEAGCRVLKT KLEAGDYVAG EYVFERKSVD DFVNSVIEGR 
VFEQAERLKS SGLKPVVVVE GDLWRELRYR RISPNAVLGA LLALSSMGVG LVYTEDKAQT
GVLVCLAARR AKKAAKAPAP KKKEADVRSL QIALLASLPG IGPRRAEELL KKYGTPLNAL
LNYKSWEVDS KSHTLIKRVL ETPFDASNTL DDYLGP