Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_0772 |
Symbol | |
ID | 5054253 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | - |
Start bp | 689013 |
End bp | 689663 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640468331 |
Product | ERCC4 domain-containing protein |
Protein accession | YP_001153010 |
Protein GI | 145591008 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1948] ERCC4-type nuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAATTCA TCGTCCTTGT AGACACTAGG GAGCACGCCC AGGAGGTAGT TAGGCACATC AAGGAGGCAG GGTGCAGGGT CCTCAAGACT AAGCTGGAGG CCGGCGACTA CGTAGCCGGC GAGTACGTCT TTGAGCGGAA GAGCGTAGAC GACTTCGTCA ACTCGGTGAT AGAGGGGAGG GTCTTCGAGC AGGCCGAGAG GCTCAAGTCC TCCGGGCTGA AGCCCGTCGT CGTGGTGGAG GGCGACCTCT GGAGGGAGCT TAGATATAGG AGAATTTCGC CAAACGCCGT GCTCGGGGCG TTGCTCGCCC TAAGCTCCAT GGGCGTCGGG CTGGTCTACA CAGAGGACAA AGCCCAGACA GGCGTGCTGG TCTGCCTCGC GGCGAGGCGG GCGAAGAAGG CGGCGAAGGC CCCCGCCCCG AAGAAGAAGG AGGCCGACGT GAGGAGCCTC CAGATAGCCC TCCTAGCCTC CCTCCCCGGC ATTGGGCCGA GGCGCGCCGA GGAGTTGTTG AAGAAGTACG GCACGCCGCT AAACGCGTTG CTCAACTACA AGTCGTGGGA GGTAGATAGC AAAAGCCACA CCTTAATAAA GAGGGTGTTG GAAACCCCCT TCGACGCCAG CAACACGCTA GACGACTACC TAGGCCCCTA A
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Protein sequence | MEFIVLVDTR EHAQEVVRHI KEAGCRVLKT KLEAGDYVAG EYVFERKSVD DFVNSVIEGR VFEQAERLKS SGLKPVVVVE GDLWRELRYR RISPNAVLGA LLALSSMGVG LVYTEDKAQT GVLVCLAARR AKKAAKAPAP KKKEADVRSL QIALLASLPG IGPRRAEELL KKYGTPLNAL LNYKSWEVDS KSHTLIKRVL ETPFDASNTL DDYLGP
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