Gene Pars_0755 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0755 
Symbol 
ID5056417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp674321 
End bp674857 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content50% 
IMG OID640468314 
ProductCRISPR-associated Cas4 family protein 
Protein accessionYP_001152993 
Protein GI145590991 
COG category[L] Replication, recombination and repair 
COG ID[COG1468] RecB family exonuclease 
TIGRFAM ID[TIGR00372] CRISPR-associated protein Cas4 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.714771 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.862744 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCAGGC TCCTACCCGA CGTCTATGCT TATCGTTACG ACTTCAAGCG GCTTTCCCCC 
TCTGTCATAA ACGACTACGA GTACTGCCCG AGGCTTCTGT GGGTGCAACA TAGGCTTGGG
CTGAAGCTGT TTACAAAAGA CTCAGCAGTT GCCATTGTGA AGGGGAAGTT GCTACACGAG
AGGTATGAAA GAGCTGTGGC TGTGTATGAC AACGTCATAG TGGAGTACAA GGTCGAAATA
GACAATCTGG TGGGGGTTGT GGATGTTGTG ATAAAGCGTG GGGGCGTGTA CCTGCCTGTT
GAGATAAAGA CGGGGGTGGC CAGCAGGGAG GCTCACAAGA AGCAGTTACA GATATACATC
CACCTCTTGA AGGCGAAGTA CGGGTACCTG GTTTATAGAG ACAAGGTCGA GAAGGTTGAA
CGAGACGACA GCGCGTTGCA AGTACTTAGC GAGATAAAGA AGGTTTTAAC CGCCGACAAG
CCGCCGAGCG TGGAGTGCCG GAAATGCCCA TTTAAGCCTA TTTGTAGAAT TAGTTAG
 
Protein sequence
MFRLLPDVYA YRYDFKRLSP SVINDYEYCP RLLWVQHRLG LKLFTKDSAV AIVKGKLLHE 
RYERAVAVYD NVIVEYKVEI DNLVGVVDVV IKRGGVYLPV EIKTGVASRE AHKKQLQIYI
HLLKAKYGYL VYRDKVEKVE RDDSALQVLS EIKKVLTADK PPSVECRKCP FKPICRIS