Gene Pars_0739 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0739 
Symbol 
ID5055114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp657519 
End bp658211 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content60% 
IMG OID640468297 
Producthydrolase 
Protein accessionYP_001152977 
Protein GI145590975 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.715617 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACTA TTCTAGTAGA CCTAGACGGG ACGTTGTTGC CGCTAAGCGC GTGGAATCCT 
GTTTTCGCAG AGGCTTGCGC CGTGATCGCT GATAAGGCCG GCGTGTCGCC GGGGGAGGTG
TGGAGAAGGG CTAGGCAGAG GAACCTCGCC CTAATGAGGA GGCTGGACTG GCGGGCCTTC
GACTGGCAGG CCATACTGGA CTCTGTGGCC GAGGAGCTGG GCGCGGGGAG GGCACCAGAC
ATAGTCACGT TGCTACGCAA ACACCTGCCG GGCTTCCAGC TATCCGACGG CGCCGTGGAG
GCCTTAGAGG AGCTCAAGGC GCTGGGCCAC CGCGTCGAGA TAGCGACGAA CGGCCACGCG
GCCTACCAGC TACCCGTAAT ACGGCGCCTA GGCCTAGACA GACTTGTCGA CGGCGTTAGG
ACTTCCGACG TGTACAAATG CCCCAAGACC TGCCCCGAAT TCTTCAACGG GGCACACGTA
ATGGTGGGAG ACAACCCAGT GTTCGACGTA TATTTCCCAA AGAGGTTCGG CCTCCTTGCC
GTGTTCTACG GCAACTGGGA GAGGGAGGCC CTTGAGTATT CTCAAAGGCT TTTAATACCG
GCGTACAACG TGCGGCCGGA CGCCGCGGTG GAAACACTGA AGGAGCTACC CAGGACGGTA
GAGGCCGTGT TGAAAAACAA GTCCATCCCC TAG
 
Protein sequence
MATILVDLDG TLLPLSAWNP VFAEACAVIA DKAGVSPGEV WRRARQRNLA LMRRLDWRAF 
DWQAILDSVA EELGAGRAPD IVTLLRKHLP GFQLSDGAVE ALEELKALGH RVEIATNGHA
AYQLPVIRRL GLDRLVDGVR TSDVYKCPKT CPEFFNGAHV MVGDNPVFDV YFPKRFGLLA
VFYGNWEREA LEYSQRLLIP AYNVRPDAAV ETLKELPRTV EAVLKNKSIP