Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_0729 |
Symbol | |
ID | 5056201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | + |
Start bp | 645992 |
End bp | 646519 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640468286 |
Product | ZPR1-like zinc finger protein |
Protein accession | YP_001152967 |
Protein GI | 145590965 |
COG category | [R] General function prediction only |
COG ID | [COG1779] C4-type Zn-finger protein |
TIGRFAM ID | [TIGR00310] ZPR1 zinc finger domain [TIGR00340] ZPR1-related zinc finger protein |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.772749 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.600109 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCGGTGA TATACAGCGG AGAGGTGAGG TGCCCGGTCT GCGGCGCCCC GACTTTTAGG TATGTACAAC TGCTGTATGA GACGCCATAT TTCGGAAATG TACTAATTGA AAGCGGTTAC TGCTCGACGT GCGGCTACAG GCTCTTCGAC GTGGATTACG CCGAGACTGG GCGGCCGACG CGCGTCTTAT TTAAGCCTAG AGACGGGTTA GACGTTGCCA AGTCCTTTAT CGTCAGGAGC AAGACTGGGA CTATCTACTC GCCAGATTTG GGATTCACCC TGGAGCCCGG GAACCACGGA GAACCATTCA TAACCACGGT GGAGGGCTTC TTGTACAAAG TTATAGACTA CGCCGAGAGG CTAAAGGTGC TGGAGCCCGA AAGCGCTGGC CAAGTGGATA AATTCATTCA GACTGTACAA CGCAAAATCG ACGAGGGGGG CTTTACCCTA GTCGTGGAGG ATCCCTTGGG CAAGTCAGTA ATAATCCCTT ATCGGGAGGA CACGGTGACG GTCGAGCACC TAGACTAG
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Protein sequence | MSVIYSGEVR CPVCGAPTFR YVQLLYETPY FGNVLIESGY CSTCGYRLFD VDYAETGRPT RVLFKPRDGL DVAKSFIVRS KTGTIYSPDL GFTLEPGNHG EPFITTVEGF LYKVIDYAER LKVLEPESAG QVDKFIQTVQ RKIDEGGFTL VVEDPLGKSV IIPYREDTVT VEHLD
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