Gene Pars_0729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0729 
Symbol 
ID5056201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp645992 
End bp646519 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content54% 
IMG OID640468286 
ProductZPR1-like zinc finger protein 
Protein accessionYP_001152967 
Protein GI145590965 
COG category[R] General function prediction only 
COG ID[COG1779] C4-type Zn-finger protein 
TIGRFAM ID[TIGR00310] ZPR1 zinc finger domain
[TIGR00340] ZPR1-related zinc finger protein 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.772749 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.600109 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGGTGA TATACAGCGG AGAGGTGAGG TGCCCGGTCT GCGGCGCCCC GACTTTTAGG 
TATGTACAAC TGCTGTATGA GACGCCATAT TTCGGAAATG TACTAATTGA AAGCGGTTAC
TGCTCGACGT GCGGCTACAG GCTCTTCGAC GTGGATTACG CCGAGACTGG GCGGCCGACG
CGCGTCTTAT TTAAGCCTAG AGACGGGTTA GACGTTGCCA AGTCCTTTAT CGTCAGGAGC
AAGACTGGGA CTATCTACTC GCCAGATTTG GGATTCACCC TGGAGCCCGG GAACCACGGA
GAACCATTCA TAACCACGGT GGAGGGCTTC TTGTACAAAG TTATAGACTA CGCCGAGAGG
CTAAAGGTGC TGGAGCCCGA AAGCGCTGGC CAAGTGGATA AATTCATTCA GACTGTACAA
CGCAAAATCG ACGAGGGGGG CTTTACCCTA GTCGTGGAGG ATCCCTTGGG CAAGTCAGTA
ATAATCCCTT ATCGGGAGGA CACGGTGACG GTCGAGCACC TAGACTAG
 
Protein sequence
MSVIYSGEVR CPVCGAPTFR YVQLLYETPY FGNVLIESGY CSTCGYRLFD VDYAETGRPT 
RVLFKPRDGL DVAKSFIVRS KTGTIYSPDL GFTLEPGNHG EPFITTVEGF LYKVIDYAER
LKVLEPESAG QVDKFIQTVQ RKIDEGGFTL VVEDPLGKSV IIPYREDTVT VEHLD