Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_0660 |
Symbol | |
ID | 5056315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | - |
Start bp | 588192 |
End bp | 589277 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640468220 |
Product | major facilitator transporter |
Protein accession | YP_001152903 |
Protein GI | 145590901 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCTTT TCTATATTAT CCTCTTGTCC AGAGGGGTAT ACTCGCTTAT GTGGTTCTTC GTTGCGCCTG TACTCCCGCT TGTTTTGAAA GAATTCGGCG TAAGCCCAGC GCAGGCGGGC CTTCTGCCAG CGGTGTTCAT AGTAGGGGCA GCGGTCATGC AGCTACCGGC GAGCTACTTA GGCGCTCGCC ACGGCCACGA CAAGATAGCG GGGTTGGGAA TGGTCCTATT CGGCGCCTCT TCAGTACTGA TGGGGCTCGC CCCCAGTTGG GGGTGGTTAT TATTCTTCAG GGCTCTAGGC GGCATGGGGG CAGGCTTGTT CTTCTCCACG GCTGGCGCCG TGTTGATAGC CCTAAGGCCC GACGCCGTGG GGTCGGCATT GGGGTGGTAC AACGCCTCTT TCAACATCGG CGCCTTTGTG GGCTTCTACT GGGGGTATGT CGCTAATATT TTGGGCTGGC GCCTCGCCTT TGTAGCGCCG GGTCTCGCCT CGGTGGCGCT AGGACTCTTG TTGCTAAGAG GGAGGGGTTA CAAAAGCCCC GCCTCAGTGA ACAGATCGAC GTTTGTGTAT GGTCTAGCCT CGTTTCCGTT TTGGGGCGCC GTCTACGCCG CCAATAGCCT CACGGCTACG TGGCTACATC TATTTAGAGG ACTCGGCGAA GAGTGGGCTG GCGCACTCTC CTCTACGGCC ATGTTGTCGG GTTTCCTAGG CGGCTTTGTG GGGAGGCTTT ACGACACGGT GAATAATAAG CTCTTGTTGC TAGTGGGCGC CCCCCTCGTT GCGTCGCTCG TCTACTTAAT AATACCACTA GCTCCACTTG CCATCCTCCC AATCCTCATA TTCGCCTACG GCCTCTCGTT CAGTACGTAT ATTACGGCTG TCTACGCGAC GTCGTCAAGA ACTGCCGCGA ACCCAGCCGC GGCTCTCGCG GTCATAAATA TAACAAACAT GGCGCTGGGG CTACATTTCA GCTACGTCTT CTCTTTGTTA ATGACGTCGT CTCCCGCCTA CCCGTGGCTA ATGTTGTCGG TTCTCGCGCT TATTTCTGCC GTAGCCAGTT ACAAAATATA TAAAACCAAG GAGTAG
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Protein sequence | MSLFYIILLS RGVYSLMWFF VAPVLPLVLK EFGVSPAQAG LLPAVFIVGA AVMQLPASYL GARHGHDKIA GLGMVLFGAS SVLMGLAPSW GWLLFFRALG GMGAGLFFST AGAVLIALRP DAVGSALGWY NASFNIGAFV GFYWGYVANI LGWRLAFVAP GLASVALGLL LLRGRGYKSP ASVNRSTFVY GLASFPFWGA VYAANSLTAT WLHLFRGLGE EWAGALSSTA MLSGFLGGFV GRLYDTVNNK LLLLVGAPLV ASLVYLIIPL APLAILPILI FAYGLSFSTY ITAVYATSSR TAANPAAALA VINITNMALG LHFSYVFSLL MTSSPAYPWL MLSVLALISA VASYKIYKTK E
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