Gene Pars_0660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0660 
Symbol 
ID5056315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp588192 
End bp589277 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content56% 
IMG OID640468220 
Productmajor facilitator transporter 
Protein accessionYP_001152903 
Protein GI145590901 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCTTT TCTATATTAT CCTCTTGTCC AGAGGGGTAT ACTCGCTTAT GTGGTTCTTC 
GTTGCGCCTG TACTCCCGCT TGTTTTGAAA GAATTCGGCG TAAGCCCAGC GCAGGCGGGC
CTTCTGCCAG CGGTGTTCAT AGTAGGGGCA GCGGTCATGC AGCTACCGGC GAGCTACTTA
GGCGCTCGCC ACGGCCACGA CAAGATAGCG GGGTTGGGAA TGGTCCTATT CGGCGCCTCT
TCAGTACTGA TGGGGCTCGC CCCCAGTTGG GGGTGGTTAT TATTCTTCAG GGCTCTAGGC
GGCATGGGGG CAGGCTTGTT CTTCTCCACG GCTGGCGCCG TGTTGATAGC CCTAAGGCCC
GACGCCGTGG GGTCGGCATT GGGGTGGTAC AACGCCTCTT TCAACATCGG CGCCTTTGTG
GGCTTCTACT GGGGGTATGT CGCTAATATT TTGGGCTGGC GCCTCGCCTT TGTAGCGCCG
GGTCTCGCCT CGGTGGCGCT AGGACTCTTG TTGCTAAGAG GGAGGGGTTA CAAAAGCCCC
GCCTCAGTGA ACAGATCGAC GTTTGTGTAT GGTCTAGCCT CGTTTCCGTT TTGGGGCGCC
GTCTACGCCG CCAATAGCCT CACGGCTACG TGGCTACATC TATTTAGAGG ACTCGGCGAA
GAGTGGGCTG GCGCACTCTC CTCTACGGCC ATGTTGTCGG GTTTCCTAGG CGGCTTTGTG
GGGAGGCTTT ACGACACGGT GAATAATAAG CTCTTGTTGC TAGTGGGCGC CCCCCTCGTT
GCGTCGCTCG TCTACTTAAT AATACCACTA GCTCCACTTG CCATCCTCCC AATCCTCATA
TTCGCCTACG GCCTCTCGTT CAGTACGTAT ATTACGGCTG TCTACGCGAC GTCGTCAAGA
ACTGCCGCGA ACCCAGCCGC GGCTCTCGCG GTCATAAATA TAACAAACAT GGCGCTGGGG
CTACATTTCA GCTACGTCTT CTCTTTGTTA ATGACGTCGT CTCCCGCCTA CCCGTGGCTA
ATGTTGTCGG TTCTCGCGCT TATTTCTGCC GTAGCCAGTT ACAAAATATA TAAAACCAAG
GAGTAG
 
Protein sequence
MSLFYIILLS RGVYSLMWFF VAPVLPLVLK EFGVSPAQAG LLPAVFIVGA AVMQLPASYL 
GARHGHDKIA GLGMVLFGAS SVLMGLAPSW GWLLFFRALG GMGAGLFFST AGAVLIALRP
DAVGSALGWY NASFNIGAFV GFYWGYVANI LGWRLAFVAP GLASVALGLL LLRGRGYKSP
ASVNRSTFVY GLASFPFWGA VYAANSLTAT WLHLFRGLGE EWAGALSSTA MLSGFLGGFV
GRLYDTVNNK LLLLVGAPLV ASLVYLIIPL APLAILPILI FAYGLSFSTY ITAVYATSSR
TAANPAAALA VINITNMALG LHFSYVFSLL MTSSPAYPWL MLSVLALISA VASYKIYKTK
E