| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_0641 |
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| Symbol | |
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| ID | 5055047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | + |
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| Start bp | 569062 |
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| End bp | 571119 |
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| Gene Length | 2058 bp |
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| Protein Length | 685 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640468200 |
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| Product | TRAP transporter, 4TM/12TM fusion protein |
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| Protein accession | YP_001152884 |
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| Protein GI | 145590882 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4666] TRAP-type uncharacterized transport system, fused permease components |
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| TIGRFAM ID | [TIGR02123] TRAP transporter, 4TM/12TM fusion protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGAAGG TCAAGCTTCT CCAGTACTTC CTTGCCGCTG CCTCTATTTA CCACTTATAC
CTATTTTTCC ACCCATATAC TCCGCTCAGC TACGTCGTAA GAATACCAAT CTTTGACCTT
ACCCAGGTAG AGAGGGCGAC TCACGTCTGG TTTATAATAA CAGCCGGCTA CCTCCATTCC
TATGTCTTCC CGCCGAGGCC TTCCCCATTT GCTGGCTATA TACTAGCCGC ACTCGCTTTG
GTACCTACGC TCCTACTACT ACCGCAGATA GGGCCTATTG AGGCTATGTA TGTACTTCTT
GCATACATCA TAGCTGTGGG ACCCCTGACA ACGAAGTATA GAAAAGAGCT TGACCTAGTC
GGCGCCATTT TGGCATTTCT CCCCTATATC TACCTTGTTC TAAATTACGA GGAGCTGATC
TACCGCGCCG TTACGCCAGA AAGGTGGGAT CTCGCAATGG GGTGGGGCTT TACGCTCCTG
TTGATGGGCG TCGTGTATCG CTTTGTAGGC GGCGTCTTGT CAATTATCGC ATTACTGTTC
ATGTGGTACG ACATATTCGG CTACGTCTTT CCGCCACCTT GGAGAATACC TGGGTTCGGC
GTCGATTTTC TCATTGGTAA AATATATATT GAAACAGAGG CGGCGCTCTT CGGCACAGTG
ACTGGAGTCT CCATGTCGTA TATTGTCTAT TTCTCGATAT TCGGCGCCTT GCTGGCCTCG
CTAAAACTGG GCGACAAATT AGCGAGGGGA GTTTTTGTTA TTCTGGGAAA AAGTCCAAAA
AGCGTGGGGC GCGCCGCTGT TACGCTGGGA GTTATACAGG GCATGGTTTC CGGGTCAGGC
GCGGCAGATG CGGCGTATGT AGGCAATACT CTGAAAAACG CTTTCAAGAA GGCCGGATAT
GACGACCTCA CAGCAGCAGG TCTAGTGGCG AATGTGGGCA CAGTCGCGTT GATAACACCT
CCGATCCTCG GCGCAATTGC CTTCATAATG GCAGAGGTGT TAGCTATACC TTATACTTGG
GTTATAATAA TGTCTATTCC CATAGCTTTT CTGTATATTT TTTCAATACT GCTTTACAAC
GAGTACTATG TTGAAAAGGC GAGGCTGAGT TCGCTCGAGA TTAAAAAAGA GCGGTTAGCG
GAGTGGTTGA AGAGCGGCGG GTGGGCCGGA CTTCTGCCTA TCGTAACAAT TTTGGCTATT
TTATTTGCGG GCTATACAAT AACGGCAGCT GTGGTAGTGG CGACTCTAGT TTCAATAATT
GCGGCGTTTA TGGTAAAGCC CAGACCAACT GGAAAAGACC TATTGGAAGG GCTGGCTAAC
GGATTTAAGC TGTTGATATC GGTAGGCAGT TCAATAGTTG TAGCTAACTT CATAATGGCC
ATGGTGGTGG TTTCCGGTCT AGGAACCACT TTCTCAATAT ATCTCGTCAA TATCTCGCAA
AATCTTTACA TCGCTATGAC ATTTGCCGCT GTCTTTTCAC TAATTCTCGG CATGGGAGTG
CCGCCAACTG CGACGTATAT AACCGCATCG CTTTTAACGG CACCTGCCAT AGTGAAACTC
GCAACCGCTT CAGGTATGCC GGAGCAAGCC GCGTTGCTGG CAACACACAT GTTCCTATTC
TACTACGCGA TGTTGGCTGA TATCACGCCG CCGGTGGGGC TTTCAAATTT CGCCGCCGCC
TCGGTATTCG GCGTTAATCC CATAGACGTT GGCATAAAGG CTGCTAGAGT GGCGTTACCC
AAATATATCA TTGCCGCGTT ATTCCTGACT AGTTACGAAA CTACAGCGTT GTTAATAATG
CCGACATATC TCACCGCAGG TTTGCAATAC ACAATTACCA TGTTTTTCAC CAAATTGATT
CTAACTATAA GTGCTATCTG GGCCTTTACA ATAGCAAATG TAGGCTTGGT AGCAGGTAAA
AATTTGAGCC TTCTCTACAG AATTGTGGCG TTGTTGATAG GGGGCTTTTT GATCGTGCCT
AGCCTAGTGT TAAATATTAC TGGATTTATT ATGTTGCTCT TATTCTATGT ATATACAAGA
TTTAAACTCA AGGTCTAA
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| Protein sequence | MEKVKLLQYF LAAASIYHLY LFFHPYTPLS YVVRIPIFDL TQVERATHVW FIITAGYLHS
YVFPPRPSPF AGYILAALAL VPTLLLLPQI GPIEAMYVLL AYIIAVGPLT TKYRKELDLV
GAILAFLPYI YLVLNYEELI YRAVTPERWD LAMGWGFTLL LMGVVYRFVG GVLSIIALLF
MWYDIFGYVF PPPWRIPGFG VDFLIGKIYI ETEAALFGTV TGVSMSYIVY FSIFGALLAS
LKLGDKLARG VFVILGKSPK SVGRAAVTLG VIQGMVSGSG AADAAYVGNT LKNAFKKAGY
DDLTAAGLVA NVGTVALITP PILGAIAFIM AEVLAIPYTW VIIMSIPIAF LYIFSILLYN
EYYVEKARLS SLEIKKERLA EWLKSGGWAG LLPIVTILAI LFAGYTITAA VVVATLVSII
AAFMVKPRPT GKDLLEGLAN GFKLLISVGS SIVVANFIMA MVVVSGLGTT FSIYLVNISQ
NLYIAMTFAA VFSLILGMGV PPTATYITAS LLTAPAIVKL ATASGMPEQA ALLATHMFLF
YYAMLADITP PVGLSNFAAA SVFGVNPIDV GIKAARVALP KYIIAALFLT SYETTALLIM
PTYLTAGLQY TITMFFTKLI LTISAIWAFT IANVGLVAGK NLSLLYRIVA LLIGGFLIVP
SLVLNITGFI MLLLFYVYTR FKLKV
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