| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_0640 |
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| Symbol | |
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| ID | 5054913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | + |
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| Start bp | 567655 |
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| End bp | 568725 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640468199 |
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| Product | TRAP transporter solute receptor TAXI family protein |
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| Protein accession | YP_001152883 |
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| Protein GI | 145590881 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAGCA CTACAGTATT AGTAATTGGG ATAATCATAG TCGCCCTAGT AGTTGCAGTA
GTTGCGTTGT TGTCACAACC TGCTTCTACT CCTACTCCCA CACCTAGTCA AACATCCCAG
CAACAAACTC AACAGCCACC CCCTACACGT TATAGTGTAA TAATAGCTAC AGGAGGGACA
GGAGGCGTCT ACTACTACTA TGGTGGGGTA ATTGCGGGGA TTCTAAAGAA CTATACAAAT
ATAGACGCAA CTTCTATTCA GACGGCAGGC TCTATTGATA ACTTACTCCT AATTAGAGAC
AAAACCGACC CCAAGCGGGG GATTTACTAC TGCGCCACGA CACTACCAGA GTCGGCTTAT
CTAGCTTACA CGGGACAACA TGAGAAATTC AAAGACAAAC CTGCACCTAT TGCTATACTG
TGGGCTATGT ATCCCAACTA CCTACATATT GTGACTAGGA GCGACTCGGG GATTAAGTCT
ATATACGACT TAAAAGGCAA ACGCGTCTCC ACAGGAGCTC CTGGAAGCGG CACCGAAATT
GAGGCTCTCC TTGTATTACA GATATTAGGC ATAGACCCTG CTAAAGACTT CTCAAAATGG
GAGAGGCTAG GCGCTGCTGA GAGCGCCGAC GCTTTAAAAA GCGGCACAAT TGACGCCTAT
TTCTGGAGCG GCGGCCTACC CACGTCCTCA ATTGTAGAGC TTGGAGTATC ATTAAAACAA
CAAGGCGTGT CGCTGGTGCT AATAGAGATA CCAGGTGAAG TTATTAATGC GTTCACCCAG
AAATTCCCAG GAGTCGCTAC CAAAGGCGTG ATACCGAAAA GCGTCTATGG TACTGAAAAA
GACACTCAAA CTTTAACTTT TTGGAATATG TTTGTATGCC ATAAAGATAT GCCGGATGAC
TTGGCGTATC TCATTACAAA AACTGTATTT CAACACCTTG ACATACTACA AGCTTCTGTA
AAAGCCGCAA AAGATACAAA TCTTCAGAAT GCGCTTCTCT ACTACGGCGG GAGTATACCG
TATCACCCAG GCGCCCTTCG CTACTACAAA GAAGTTGGCG TATTAAAGTG A
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| Protein sequence | MKSTTVLVIG IIIVALVVAV VALLSQPAST PTPTPSQTSQ QQTQQPPPTR YSVIIATGGT
GGVYYYYGGV IAGILKNYTN IDATSIQTAG SIDNLLLIRD KTDPKRGIYY CATTLPESAY
LAYTGQHEKF KDKPAPIAIL WAMYPNYLHI VTRSDSGIKS IYDLKGKRVS TGAPGSGTEI
EALLVLQILG IDPAKDFSKW ERLGAAESAD ALKSGTIDAY FWSGGLPTSS IVELGVSLKQ
QGVSLVLIEI PGEVINAFTQ KFPGVATKGV IPKSVYGTEK DTQTLTFWNM FVCHKDMPDD
LAYLITKTVF QHLDILQASV KAAKDTNLQN ALLYYGGSIP YHPGALRYYK EVGVLK
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