Gene Pars_0638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0638 
Symbol 
ID5056400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp565414 
End bp566619 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content62% 
IMG OID640468197 
Productamidase 
Protein accessionYP_001152881 
Protein GI145590879 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.921571 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACGG ATTTGTCCAA GAGGCTGGAG GAGGCAAAGC GGCGGGCTGA TCTGAACTAC 
TTCATATACT TAAATGAAAA CGCCCCGGCG GAGCTGGAGG CCGTTAAGAG AGCTGGGCGT
TGTGGAGCTC TTTGCGGCCT TGTCGTCGCC GTAAAGGACA ACATAGAAGT GGCGGGGATG
CCTATTACAA ACGGCGCTCC GTACATGAGG AGGATGGCCG ACAGAACGGC GCCTGTGGTG
AGGCGCCTCA TCGCCGAGGG GGCGGTGGTC ATCGGCAAGA CGAATATGCA CGAGCTGGCT
CTAGGCGCCA CGAACATCAA CCCCCACTAC GGCCCTACGA GGAACCCACA CGACCCTTCG
CGGATTACGG GAGGCTCCAG CGGTGGGAGC GCAGGGGCGG TGGCAGTTGG CGTTGCGGAT
CTGGGGGTAG GTACTGACAC GGGAGGCTCC GTGAGGATCC CCGCGGCACT GTGTGGGGTA
GTTGGCTACA AGCCACCGTA CGGCAAAATA CCGACTGAGG GGGTGCTACC CCTGGCGCAG
AGCCTCGACC ACGTCGGCTT CATAACAAGG ACAGTCGAGG AGCTTGTGCA CATCTTGTCG
GCGGCTGGGT GGGGCCCCGC GGAGCTACCT CAGATGAAGA GGTTTAGATT CGCCGTGTTG
ATAGGCGTGG CGGAGAACAC GAAACACGTA GACAAGGCGT TTTGGAAGGC CGTCTCAGTA
CTTGAGTCCA TCGGCGGGAT TCGGGACGAG GTATTCATAG ACGGGGGAAG GTATGGGGCG
GCCCGGGCTG CCATCCTCCT CTCAGAAGCC GCGGCGAATT ATTACCACTA CCTAAGAAGC
GCGGCGGAGC ACATGGGACG CGACGTGGCG GCCCTCCTCA GCGCCGGCGC CGCCCTCCCC
GCCGTGGCTT ACGTAACTGC GAAGCGGGTA AAAGAGGAGG CTACGAGGTT TTTCGAGTCG
CTGTTCAAGA AATACGACGT GGTGGCGACG CCCACGACGG CCACCGAGGC GCTGGCTATT
GAAGAGGCGG GCAAATTAGC TGTTAGGGGG AGGCTACTGG CCTACACGGA GCTCTTCAAC
CTGACGGGGC ACCCAGCCCT ATCGGTACCT GCGCCGGCCT CCGGCCTCCC CGTCGGCCTG
CAAATAGCCG CACGCGACGA AGACGTCCTC CTCTCAATAG CCAAGGCCTA CGAGGAGGCC
CTCTGA
 
Protein sequence
MNTDLSKRLE EAKRRADLNY FIYLNENAPA ELEAVKRAGR CGALCGLVVA VKDNIEVAGM 
PITNGAPYMR RMADRTAPVV RRLIAEGAVV IGKTNMHELA LGATNINPHY GPTRNPHDPS
RITGGSSGGS AGAVAVGVAD LGVGTDTGGS VRIPAALCGV VGYKPPYGKI PTEGVLPLAQ
SLDHVGFITR TVEELVHILS AAGWGPAELP QMKRFRFAVL IGVAENTKHV DKAFWKAVSV
LESIGGIRDE VFIDGGRYGA ARAAILLSEA AANYYHYLRS AAEHMGRDVA ALLSAGAALP
AVAYVTAKRV KEEATRFFES LFKKYDVVAT PTTATEALAI EEAGKLAVRG RLLAYTELFN
LTGHPALSVP APASGLPVGL QIAARDEDVL LSIAKAYEEA L