Gene Pars_0637 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0637 
Symbol 
ID5054391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp564675 
End bp565277 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content56% 
IMG OID640468196 
Producthaloacid dehalogenase superfamily protein 
Protein accessionYP_001152880 
Protein GI145590878 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2178] Predicted RNA-binding protein of the translin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.611822 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTTAT ACATCCACGA TAATTGCGCC GTGCTAGACG TGAGGAATCT CTACAACGAA 
CTGCGGGAAT ACGAGTCTGT AAAAGACGAG GTAGTCCAGA CCTCCATCAA GGTGGCGAGG
CTGTCGAAGG CCGTCGTCTA CTCCGTAATT CGTAAAGACT TTGAGGCGGC TGAGAGGGCC
CTCCGCGAGA TGAACCAGAC AGCGGCTAAG CTAAAGGAGC TAATAGCCAA GTGGCCCATG
TTCTACGGAA GCGCCGCCAC CGGCCTGCAA GAATACGTCG AGGCCAACGT CCTCTACTAC
TTCATGAAAG AGGGGAAGCT CCCCCCGCGC GAGGAGCTCG GAGTAGACGT GTACGTCTAC
CTAATGGGCG TCGCCGACGT GGCGGGGGAG CTGGGCAGGT CGGCCACAGA GGAGCTCTTA
AGAAAGAACA TAGAAGCGGC GAAGAGGTTG AAAGAGGTCG TGGAGAGGCT CTACCTGGAC
CTCCTGTCCC TAGAGCCGAG GGACTTCGAG CTCAGGAAAA AGGTTGACTA TGTGGGCTCC
CAGGCCAACT GGATATCCGA GAAGCTGTTC TACGCCACTA CTTGCCGGAG GGAGGAAGCC
TAA
 
Protein sequence
MVLYIHDNCA VLDVRNLYNE LREYESVKDE VVQTSIKVAR LSKAVVYSVI RKDFEAAERA 
LREMNQTAAK LKELIAKWPM FYGSAATGLQ EYVEANVLYY FMKEGKLPPR EELGVDVYVY
LMGVADVAGE LGRSATEELL RKNIEAAKRL KEVVERLYLD LLSLEPRDFE LRKKVDYVGS
QANWISEKLF YATTCRREEA