Gene Pars_0627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0627 
Symbol 
ID5055946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp557184 
End bp557426 
Gene Length243 bp 
Protein Length80 aa 
Translation table11 
GC content43% 
IMG OID640468185 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001152870 
Protein GI145590868 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.959135 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGAGG CGTTTGTGTT TATAAACACG GAAATCGGAG CGGAGGACGA GGTGATGGAG 
GCGTTGATTA AGATGCCCGA GATCAAAGAG GCGTTGATTG TGTATGGGCC TTACGACCTA
GTAGTAAAGG TGTCAACAGA TACTGCTGAG AATTTGAGGA AGCTTATTAG TGAGAAGATT
AGGAAGCTTC CAAAGATTAA AAGCACGACG ACGCTAATAA TTGCGAAGTC TATAGTAAAG
TAG
 
Protein sequence
MVEAFVFINT EIGAEDEVME ALIKMPEIKE ALIVYGPYDL VVKVSTDTAE NLRKLISEKI 
RKLPKIKSTT TLIIAKSIVK