Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_0626 |
Symbol | |
ID | 5055942 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | + |
Start bp | 556737 |
End bp | 557183 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640468184 |
Product | 30S ribosomal protein S6e |
Protein accession | YP_001152869 |
Protein GI | 145590867 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2125] Ribosomal protein S6E (S10) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.798108 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.959135 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTACTT TCAAGCTAGT GCTATCAGAT CCAATCAGCG GGAAGGCGAT GCAGTTCGAG ATAAAAGATC CGCTTGCACA GCGCTTCGTC GGGTTGAAAA TAGGAGACGA GATAGACGGC GTAATACTGA AGGACTTCAT ATCGCTACCC AAAGGCGCAA AGATCAAAAT AACCGGCGGT AGCGGCATAG AGGGCGCGCC CATGGTCCCC GGCGTCCCGG GGCCAGTCAA GCGCTACATC CTCGCAGAGG GCCCGCCGGG CTACCGCCCA AAGAAGCGGG GAATGCGTAG GAAGAAACTC GTGAGGGGGG ACACAATCAG CGACTCCATC GTGCAGATAA ATGCGGTGAT CGTCTATCCC AAAGACTACA GCGGCCCGCC CGCGATTCCG ATAGGCGCAA AGGAGCTGGA GAAGTTGACA AAAAAGGAGG AGGCCGCCGC CCAGTAA
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Protein sequence | MPTFKLVLSD PISGKAMQFE IKDPLAQRFV GLKIGDEIDG VILKDFISLP KGAKIKITGG SGIEGAPMVP GVPGPVKRYI LAEGPPGYRP KKRGMRRKKL VRGDTISDSI VQINAVIVYP KDYSGPPAIP IGAKELEKLT KKEEAAAQ
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