Gene Pars_0605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0605 
Symbol 
ID5055003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp541024 
End bp541707 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content59% 
IMG OID640468163 
Producthexapaptide repeat-containing transferase 
Protein accessionYP_001152848 
Protein GI145590846 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1207] N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.51526 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.572168 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGATTCG TGTCGAAAAA GGCCGTCGTC CAAGCCCGCT ACGTCTCGCC CGACGCCTAC 
ATATACGGCC CCACACACAT CGGAAGCGGT AGCTACGTAG ACGCGGCCGT AATTGGGTAC
CCCACTCGCC AGAAGATACT AAAGGGCAAC GGCCCGCTGG ACGAGCTGAG CGACGGCGCG
AAGATTGGCG AGTTGGTGAT TATTAGAAGC GGCGTGGTTA TTTACGAAAA CGCGGAGATC
GGCGACGGCT GCGAGTTCGG CCACAACGTC CTAGTGAGGG AGCTAGCGAA AATCGGGCGT
GGAGTGAGGA TAGGCACCAA CGCAATTGTA GAACGCGACG TGAAAATCGG AGACAGGGCC
TGGATCCAGT CCATGGTCTA CATACCAAAC GGCACGGTGA TAGAGGAGGA CGTCTTCATT
GGCCCAAATG CAGTTATCAC CAACGACAAG TACCCACCCA GCAAGAGGCT CGCCCCCGTA
GTGATAAGGA GGGGCGCGGT AATAGGGGCG AACGCCACAC TCGTGGCGGG GGTCGAAATC
GGGGAAGGCG CAGTGGTGGC GGCGGGTGCG GTGGTCACCA GAGACGTACC CCCCGGCGCC
GTAGTCGCCG GGGTCCCCGC CCGGGTAATC GGAAAAGCTG AGGATTACCT GAAAAAACGG
GCTATTTACG AGACTAGCGG CTGA
 
Protein sequence
MGFVSKKAVV QARYVSPDAY IYGPTHIGSG SYVDAAVIGY PTRQKILKGN GPLDELSDGA 
KIGELVIIRS GVVIYENAEI GDGCEFGHNV LVRELAKIGR GVRIGTNAIV ERDVKIGDRA
WIQSMVYIPN GTVIEEDVFI GPNAVITNDK YPPSKRLAPV VIRRGAVIGA NATLVAGVEI
GEGAVVAAGA VVTRDVPPGA VVAGVPARVI GKAEDYLKKR AIYETSG