Gene Pars_0569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0569 
Symbol 
ID5055693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp510263 
End bp510946 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content59% 
IMG OID640468130 
Productglycerophosphoryl diester phosphodiesterase 
Protein accessionYP_001152815 
Protein GI145590813 
COG category[C] Energy production and conversion 
COG ID[COG0584] Glycerophosphoryl diester phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACATCT TGGACATTCT CAAGAGGCGG GCCATAGTGG GGCACCGGGG TTATCCTGTA 
AAGGAGCTTG AAAACACGTT GCCATCAATA GAGGCAGCGA TCAAAAGCGG CGCCGACATT
GTGGAAGCCG ACGTCCAGAT GACAGCTGAC GGAGTCGTGG TGCTAAGCCA TGACGACACT
CTAGAAAGGA CTTTCGGCGT CTTCCTAAAC GTGAGGACTG CAACGTGGGA AGAGGTGAGG
CGTGTGACCA AAGGCAGAGT GCCCTCGCTG AGGGAGGCCC TGGAGCTGGT GGCTGAGAGG
GCTGGGGTTT TCGTAGAGGT TAAACACCCC GAAGACGCGG CTGCCGTGTG GAGGGTTATA
AAAGAAGCCG GGGCCGCCCG CTGGGCCGCC GTAATCAGTT TCCACGACCA AGCCCTAGCC
CAAGTGGAGG GGTACAAGGG GCTTGTATAT GCCAAGCCCC CAGGCCGCGT GTTGGACGCC
AAGAAGCTTA GATGTCACAT AGTCCTTCCC CGCTACAGCC TAGCCACCGA GAAGGCCATA
TCCCTAGCCC ACAAGCTTGG CCTCTACGTC GTGGTGTGGA CCGTCAACGA CCCAGCCACG
GCGGCGGAGC TGTGGAAGAG GGGTGTAGAC GGCATAGCCA CAGACGACGT GGAGGCCATA
TTAAAGGCGC TGGGCCGCAA ATAG
 
Protein sequence
MDILDILKRR AIVGHRGYPV KELENTLPSI EAAIKSGADI VEADVQMTAD GVVVLSHDDT 
LERTFGVFLN VRTATWEEVR RVTKGRVPSL REALELVAER AGVFVEVKHP EDAAAVWRVI
KEAGAARWAA VISFHDQALA QVEGYKGLVY AKPPGRVLDA KKLRCHIVLP RYSLATEKAI
SLAHKLGLYV VVWTVNDPAT AAELWKRGVD GIATDDVEAI LKALGRK