Gene Pars_0564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0564 
Symbol 
ID5054660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp505133 
End bp507502 
Gene Length2370 bp 
Protein Length789 aa 
Translation table11 
GC content60% 
IMG OID640468125 
Productheavy metal translocating P-type ATPase 
Protein accessionYP_001152810 
Protein GI145590808 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2217] Cation transport ATPase
[COG2608] Copper chaperone 
TIGRFAM ID[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGATTT CAATAGGGCT GAAAGTGAGG GGTCGTGAGA CGGTGCTGAA GATTTTGGGT 
ATGCACTGCG CAACCTGCTC CCTCACAGTG CAGAGGGCTC TCCTCTCAAC TCACGGCGTG
AAGTGGGCCG AGGCCTCTCT CGCCAGCAAC GAGGCGAAGC TGATAGTAGA CCCGGAGGTT
CTGGACTACG CCGAGTTGCT TAAGGCGGTG AGGCGCGTCG GCTACGACGT ATATAGAGAG
TCGGCCTATA TCGCCGCGGA ATTCCGCCCT GAGGAGGCCG ATGTGGTGGA GAGGAGGGCG
ATGGGCTGGG GGGTCTTCTA CGCGAAGGCG AATCCAGCCA CGGGCGTCGT CTACGTCGAG
TACAACCCTC TGGAAATAAA CGTAGAAGAC GTTGTAAGGC GGCTGGAAGA GGCTGGGTAC
AAGGTTAAGG ATGTTAGAAA AGGAGGTGTT GAGGTAGATA TTGATAGGCG CGCCGCTGAG
CTGGAGGCAA GGGATATCAG ACGTAGGCTA ATACCAGCGG TTGCCATATC AATCTTGCTG
GTGCCGGTGA TGTTCGGCAT TGAGCTCATA CCGCAACTTG TCCAAGCGGC GCTAGCGGCT
GTTGTGCAGT TCTACTCCGG GTGGAGGTTT ATCTCAGGCG CCTTCCGCGC GTTTAGGAAC
AAGACGGCGA ATATGGACAC CTTAGTCACG TTGGGCACCC TCGGCGCATT CCTATACAGC
ACCTACGCGG CCTTTACCGG AGGATATACG TTTTTCGAGA CCTCCGCCTT GGTTATTACC
TTTGTGCTAG CGGGGAGGTA TGCGGAGAGC TTAATGAAGC TACGCACGGG AGACGCCGTG
AGGAAGCTGG CCCAGCTCCA GCCTCCTAAG GCCAGGGTAA GGAGAGGCGA GGGCTGGGCC
GAGGTAGACG CCTCGAATAT AAGGCCCGGC GAAGTAGTGG AGGTGAGAGA GGGGGAGAAG
GTGCCCGTGG ACGGCTATGT AGACGACGGG GTGGGGGCGG TGGACGAATC CGCCTTCACC
GGAGAGCCCA TGCCCGTCGA GAAGAGGCCC GGCGACTTAG TGCTGGCGGG AACAACGCTG
GTCGGGGGGA GGCTTTTGGT GAGGGCCACC AGATCGGGCA ACGCCACGTA CCTGGCAGAG
GTGGTGAGGC TGGTGAGGCA GGCCCAAAAC GCGAAGTTGC CAATCCAGAG ACTTGTGGAT
CGGGTGTCCG GAGCCTTCAC TTGGGCCGTC ATAACAGTGG CCTCTGCTAC ATTAGCCGGG
TGGCTCCTCT TAGGCGCCCC GGTTTGGCAA GCGCTTTTAT TTGCAGTTGC CGTCTTAGTA
GTTGCTTGTC CATGCGCCTT GGGCTTAGCC ACGCCGCTGG CGGTGGTTGT GGGCATTGGG
AGAGCCGCTG AGAAGGGGCT TTTAATCAAA AACGCCGAGG CCTTAGAGAA GGCCTTGAAG
GCTAAATACG TGGTTTTCGA CAAGACGGGC ACACTCACTG CAGGCGCACC GAAGGTGATT
AAATACGTGG GGGACGAGTT AGCGCTGTCG CTCGCGGCGT CAGCTGAGGC TAAATCTGCC
CACCCCATCG GAGCCGCCGT GGTGAAGCTC GCCGCCGAGA AGGGGTTGCC ACTGGCCGAG
CCCGAGATGT ACGAGACCTT CCCCGGCCAA GGAGTATACG CTAGGGTGAA CGGAGCGGTG
GTGGGCGTGG GCAACGAGAA GCTGGTGGAG GGCATGGGGG CCGCGATCCC CGAGGAGCTC
CGGCGCGAGG CGGAGCGCCA CAAGGCCGAG GGATATACGG TTGCCTTCGT CGTGGTTGAC
GGCGCAGTGA GGGGGTACGT GGTGGTGGGA GACGAGATGA GGCAAGAGGC GCGTGAGGTG
GTGGAAAGGC TTAGGAAAAT GGGCTACGAG CCGGTGATTT TGTCGGGCGA CAGCGAGGCG
GCCGTGGCGA GAGTGGCGGA GAGGCTGGGC ATCAGGAGGT TCTACGGCGG CAAAACCCCC
GACGAGAAGG CGGAGGTGGT GAAGGAATTG AGGAAAGAAG GCGGCGTTAT CTTCATAGGC
GATGGGATAA ACGACGCCCC CGCGCTGGCA TCTGCCGACG TGGGCATCGC CGTGGCGAGC
GGCACGGAGG TGGCCAAGGA GGCGGGCGAC GTGGTGGTGA GGAAAGGGGA TCTCACAAAA
GTGGCGGAGT TCCTAGACTT GGCGAAGAAG ATTATGGGCA ACGCCCGCTT CAACCTCTTC
TGGGCTTTTG CCTACAACGC CGCCCTAATA CCCATAGCGG CGGGGCTATT CTACCCCACG
CTGTACCTCC GTCCCGAGCT CGCCGGCTTG GCCATGGCGC TGAGTAGCAT ATCAGTAACA
ATAAACTCCC TCAGACTGAA AAGAGCTTAG
 
Protein sequence
MEISIGLKVR GRETVLKILG MHCATCSLTV QRALLSTHGV KWAEASLASN EAKLIVDPEV 
LDYAELLKAV RRVGYDVYRE SAYIAAEFRP EEADVVERRA MGWGVFYAKA NPATGVVYVE
YNPLEINVED VVRRLEEAGY KVKDVRKGGV EVDIDRRAAE LEARDIRRRL IPAVAISILL
VPVMFGIELI PQLVQAALAA VVQFYSGWRF ISGAFRAFRN KTANMDTLVT LGTLGAFLYS
TYAAFTGGYT FFETSALVIT FVLAGRYAES LMKLRTGDAV RKLAQLQPPK ARVRRGEGWA
EVDASNIRPG EVVEVREGEK VPVDGYVDDG VGAVDESAFT GEPMPVEKRP GDLVLAGTTL
VGGRLLVRAT RSGNATYLAE VVRLVRQAQN AKLPIQRLVD RVSGAFTWAV ITVASATLAG
WLLLGAPVWQ ALLFAVAVLV VACPCALGLA TPLAVVVGIG RAAEKGLLIK NAEALEKALK
AKYVVFDKTG TLTAGAPKVI KYVGDELALS LAASAEAKSA HPIGAAVVKL AAEKGLPLAE
PEMYETFPGQ GVYARVNGAV VGVGNEKLVE GMGAAIPEEL RREAERHKAE GYTVAFVVVD
GAVRGYVVVG DEMRQEAREV VERLRKMGYE PVILSGDSEA AVARVAERLG IRRFYGGKTP
DEKAEVVKEL RKEGGVIFIG DGINDAPALA SADVGIAVAS GTEVAKEAGD VVVRKGDLTK
VAEFLDLAKK IMGNARFNLF WAFAYNAALI PIAAGLFYPT LYLRPELAGL AMALSSISVT
INSLRLKRA