Gene Pars_0561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0561 
Symbol 
ID5055275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp502937 
End bp503410 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content46% 
IMG OID640468123 
Producthypothetical protein 
Protein accessionYP_001152808 
Protein GI145590806 
COG category[S] Function unknown 
COG ID[COG2512] Uncharacterized membrane-associated protein/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTTCA ATTTTGTGAG ACTCGTCGTT TTAATAGCTA TAGCAGTAAC CGCGGCGTTT 
CTACTAGATT ATGTGCACGT TAGGGTTATG TGTCCCCTCT GCCCGTTCCC CTCGCCTATG
TTACCTGTAT TCGCCCTTCT CGTAATTCTC ACAGCGGCCG TGTTCTACTT CTTCTTCACA
TTTAAACCTG TAAAGACGCA ACCACAGGGG TTGCCCCTTG TGATATCTAA TTTATTAAGA
GAGCCAGAGC GCTCTATTTA TATAAAAATA TACGAGAAGG GGGGTGAGGC CTATCTTTCA
GAGGTGGCGA AGGAACTAGG TCTTAGAAAG CTGAGGGCTT GGAGAGCGGC CCAGAGGTTG
GCGGAGAAAA ATCTCGTGGT TTTGGAAAAG AAGTCGGGTA GGCTAGTGGT GAGGCTGAGA
CCCCTTGAAG AGCTGTCTAT ACAGCCAATA CACCGCCAGA ATTATAAACA ATAA
 
Protein sequence
MVFNFVRLVV LIAIAVTAAF LLDYVHVRVM CPLCPFPSPM LPVFALLVIL TAAVFYFFFT 
FKPVKTQPQG LPLVISNLLR EPERSIYIKI YEKGGEAYLS EVAKELGLRK LRAWRAAQRL
AEKNLVVLEK KSGRLVVRLR PLEELSIQPI HRQNYKQ