Gene Pars_0533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0533 
Symbol 
ID5055387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp480566 
End bp480934 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content63% 
IMG OID640468095 
Producthypothetical protein 
Protein accessionYP_001152780 
Protein GI145590778 
COG category[R] General function prediction only 
COG ID[COG3193] Uncharacterized protein, possibly involved in utilization of glycolate and propanediol 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.773932 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCC TCGACGCCAT AAGGCTTGGC GTCGAGAAGG CGGAGGCCAT GGGCATCCGC 
GTGGCGATAG CCGTCGTGGA TCTCCGCGGC GAGGTGGTGG CCGTATACAA GATGGAGGGC
GCGTATCCCT TCACCCCCCA GGTGGCGTAT ATGAAGGCCA GGGCGGCCGC CATATTTAGG
CGCCCCACGG CGGAGCTGGC AGAGAGGGCG AGCCAGAACC TTCCCCTATA CCTAGGCCTC
ACCATCCACG CAGATCTTAT CTTCGGCAAG GGTGGACTGC CCACAACGGA GGGAGGGGTA
GGCGTCAGCG GAGGCACCGG GGATCAAGAC GAGGAAGTGG CTCGGGAGGT TGCGAAGGCC
CTGTCGTAA
 
Protein sequence
MKILDAIRLG VEKAEAMGIR VAIAVVDLRG EVVAVYKMEG AYPFTPQVAY MKARAAAIFR 
RPTAELAERA SQNLPLYLGL TIHADLIFGK GGLPTTEGGV GVSGGTGDQD EEVAREVAKA
LS