| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_0526 |
|---|
| Symbol | |
|---|
| ID | 5055769 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum arsenaticum DSM 13514 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009376 |
|---|
| Strand | - |
|---|
| Start bp | 474260 |
|---|
| End bp | 475225 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640468088 |
|---|
| Product | Rieske (2Fe-2S) domain-containing protein |
|---|
| Protein accession | YP_001152773 |
|---|
| Protein GI | 145590771 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.814974 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCAGA TCCCGAGGGA AAAGATAGAC GAGTTTGAGT TCGCGCTGTA TGAAAGCTGG
GTGGAGTGGT TCAGGCGGGA ACCTGGCATA AACGGCTATA GGCGGTTCAT AAACCAGAAG
CTTGTCGAGG AGATGACGGT GATACAGCTG GTGCGGGCCG CCATAGGCAG GCCGGAGCTC
ATGGGGGACC CCGACATATA CCACAAGATG GGGTGGATTG TGGATTGGCA CGAGAGCTCG
CTGTATCGCC GCTGGTTCGT GGCCTCCAGG TCGCTGGGGC TCAACGGGTA TAAGCTGGAC
AAGAAGAGGG CGGAGCTTCT GGACTCCGTG GTGGGGACCG CCAAGGGGGA TATAAAGAGG
GGGCTCCTCC TCCTGCGGAC TGCCCTTAAA TACGTCCACA CTGGCTACCG AGCGGCGGCG
TATTGGGCCA ACAACCGGCA CATAGCCCAG CTGGCATACA TGGCGTACAT GAGGGAGGAG
GACGAGATAA AGGTGGTGGA CGACGCCCTG CAGTTCATGG GAGTGGCCAG ACCCGACAGA
GCGGGTATGG ACATGCTGGA CTTCAACACC CTAGTGCCCA TCTTCTTCGA CTTCTTCCAG
CCGCCTGAGG CCGCCGACGA CGGGGGCCCC AAGCTGGAGG CCCCGGAGTG GGAGAGGGTC
GCCACGGTGG ATGAGCTCAG GCAACTGGGT AAGAAGATGG CCGTGGTGGG GCTGTGGCGG
GAGGTCCTGC TGGTGCCCGT CGACGGCGGA GTCGCGGCCT ACGAGAACTG GTGCACCCAC
GAGAGGGACC CCCTGCACTA CGGCTACATC CAGGGGAAGC AACTCATCTG CCTCGGCCAC
CACGCCACCT TCGACGTCAG AACGGGTAGG GTGATTCTGC ATCCCAACCA CGGCGAAGCC
AGGGTGTTGC CCAAGTACCA GGTTAAGGTG GAGGGAGGCG TGGTGTACGT CAGGGTGCCA
TGGTGA
|
|---|
| Protein sequence | MSQIPREKID EFEFALYESW VEWFRREPGI NGYRRFINQK LVEEMTVIQL VRAAIGRPEL
MGDPDIYHKM GWIVDWHESS LYRRWFVASR SLGLNGYKLD KKRAELLDSV VGTAKGDIKR
GLLLLRTALK YVHTGYRAAA YWANNRHIAQ LAYMAYMREE DEIKVVDDAL QFMGVARPDR
AGMDMLDFNT LVPIFFDFFQ PPEAADDGGP KLEAPEWERV ATVDELRQLG KKMAVVGLWR
EVLLVPVDGG VAAYENWCTH ERDPLHYGYI QGKQLICLGH HATFDVRTGR VILHPNHGEA
RVLPKYQVKV EGGVVYVRVP W
|
|---|
| |