Gene Pars_0525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0525 
Symbol 
ID5055995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp473961 
End bp474266 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content61% 
IMG OID640468087 
ProductRieske (2Fe-2S) domain-containing protein 
Protein accessionYP_001152772 
Protein GI145590770 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.705451 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGAGGG TCGCGGTAGC CAAGGTCTCG GAGTTGCCGG ACAAGCAGCC TGTGCCGCGG 
ACGGTGGGCA CGAGGGCGCT TGTGGTGGTG AGAGACGGGA AGACCGTCTA CGTGTGCGAC
GGCGTCTGTC CGCACGGCAG GTGGCTCCTC AGCTTAGGCG CCTACGGCAG TGGGAAGCTG
ACGTGTAGAG GACACGGCGC TGTTTACGAC CTCGCCACCG GGGAGGGCTC CCTAAACGGA
TACCCGCTTC ACATAAGGAG CTACAGAGCA GAGGTCGTCG GTGACGAGGT TTATATCGAT
ATATAA
 
Protein sequence
MVRVAVAKVS ELPDKQPVPR TVGTRALVVV RDGKTVYVCD GVCPHGRWLL SLGAYGSGKL 
TCRGHGAVYD LATGEGSLNG YPLHIRSYRA EVVGDEVYID I