Gene Pars_0459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0459 
Symbol 
ID5055793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp404309 
End bp404713 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content53% 
IMG OID640468024 
Producttranslation initiation factor IF-2 subunit beta 
Protein accessionYP_001152709 
Protein GI145590707 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1601] Translation initiation factor 2, beta subunit (eIF-2beta)/eIF-5 N-terminal domain 
TIGRFAM ID[TIGR00311] translation initiation factor aIF-2, beta subunit, putative 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAAGG AGTACCTCGC CCTTCTAGAA AGGGCATATA CCTTAGTCGC CCCGAAAGCC 
CAGAGGAGGA CGGAGATCCC GAAGATACAA GTTGAGAACA TGCCCAGGAA GACCATAATA
CCCAACTTCG GGGCAATCGC AAAGAGGCTT AACAGAGACA TATACTTCAT GGCGAAGTTC
TTCCAGAAGG AGCTCGCCGT GCCTGGCACC GTGGAGGGCG ACGTATTTAC GCTACACGGC
GAGAAGTCCC CCAAAGTAGT AGAGGCAGTC TACGAACGCT TCATAAGGTA TTACGTGGTA
TGTCCAGTCT GCAACTCCAT CGACACCGAG CTGAGGAAAG AGGGGAGGGT TTTTGTAATG
AAATGCCTGG CCTGCGGCGC GTCAACTCCC GTTAAGCCGC TCTAA
 
Protein sequence
MDKEYLALLE RAYTLVAPKA QRRTEIPKIQ VENMPRKTII PNFGAIAKRL NRDIYFMAKF 
FQKELAVPGT VEGDVFTLHG EKSPKVVEAV YERFIRYYVV CPVCNSIDTE LRKEGRVFVM
KCLACGASTP VKPL