Gene Pars_0450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0450 
Symbol 
ID5054441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp393529 
End bp394233 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content55% 
IMG OID640468015 
ProductABC transporter related 
Protein accessionYP_001152700 
Protein GI145590698 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.68217 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTGA GAGTTTCAAA CTTGGTGTCG GGATACGGCA GGTTGCAGGT ACTGTTCGGT 
GTATCATTCG AAGCGCCCAG CGGCTCGGTT GTGTCGATTC TTGGCCCTAA TGGCGCTGGC
AAAACCACGA CGTTGCTAAC AGTAATGGGG GTTGTGAAGC CGTGGGACGG CGTCGTTGAG
CTCGAAGGCG TAGACGTGAC GCGGCTCCCA CCGCACAGAA AAGTAGAGCT CGGAATATCC
CTCGTCCCAG AGGGTAGGAG GCTTTTCCCA GAAATGACCG TGGAAGAGAA CCTCCTGATG
GGCGCCTACA CGAAGAGGGC AAGGGATAAG ATCCACGACA GCCTTGAGTT GGTGTATTCG
CTATTCCCGC GGCTGAAGGA GAGAAGAAAG CAGAAGGCTG GCACCATGAG CGGCGGGGAG
CAACAAATGC TGGCGGTGGC TAGGGCCCTC ATGGCTAGGC CCAAGGTGTT GCTAATAGAC
GAGCCCAGCG CCGGTCTGGC CCCCAAAGTC GTGGCAGACC TATTCCAGAC AATAAGCCAA
CTAAAAAAAG ATATGTCAGT CCTACTAGTC GAGCAAAACG TCGCCGCGGC GCTTGAGATA
AGCGACTACG CATACGTGTT AGAAAACGGG AGAATAATCC TCCACGGACC CGCCGGCGAG
TTGATAGAAA ACGAGCACGT AAAAAAGGCG TACCTGGGAG TATAA
 
Protein sequence
MALRVSNLVS GYGRLQVLFG VSFEAPSGSV VSILGPNGAG KTTTLLTVMG VVKPWDGVVE 
LEGVDVTRLP PHRKVELGIS LVPEGRRLFP EMTVEENLLM GAYTKRARDK IHDSLELVYS
LFPRLKERRK QKAGTMSGGE QQMLAVARAL MARPKVLLID EPSAGLAPKV VADLFQTISQ
LKKDMSVLLV EQNVAAALEI SDYAYVLENG RIILHGPAGE LIENEHVKKA YLGV