Gene Pars_0437 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0437 
Symbol 
ID5055610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp379695 
End bp380438 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content59% 
IMG OID640468003 
Producthypothetical protein 
Protein accessionYP_001152688 
Protein GI145590686 
COG category[S] Function unknown 
COG ID[COG5493] Uncharacterized conserved protein containing a coiled-coil domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCTCG CTGAGGAGGT GAAGAGGGTT TTGTTGGAGC ACCCGGAGAT CTTGGCGGAG 
GCTCTTCTTG CGCACCCGGA GGTGGTTTAC CAAGCCCTCG CCAAGCTGGC CCCCTGGGAG
AGGCTAGCCA CGAAAGAGGA CATAGAGAGA CTGAGGTCTG AGATGGCTAC AAAAGAGGAT
TTAGAAAGGC TGAGGTCGGA GGTGGCCACC AAGGAGGATC TAGAAAAGGT GCGGGCAGTG
ATGGCCACGA AGGAGGAGTT GAGGAGTCTC GAGGAGAGGC TGGGGAAGGT GGAGAAGAGG
CTGGACGAAA TCGATGCCCA GCTGAGGTTT TTGGCTATTA GGGTGGAGGC GCTTGGGGCT
CGGTGGAGTG TTGTCAGCGA GGAGGCTTTT CGGGAGGGGG TGAGGGAGGT TCTGCGGGAG
GCTGGCTTTG TGGTGGAGAA GTGGCTTTAC TACGACGGGG AAGGGTTTAT CTACGGCTAC
CCCAGCGAGG TGGAGCTAGA CGTGGTGGTG AGGGACGGCG TTACGATGGC CGTGGAGATC
GCGTCTAGCT TGAAGAGGGC TGACCTACAC GCCGTGAGGC GGAAGGCGGA GCTGTACGAA
AAGGCGACGG GCAGAAAAGT GGACAGAGTG GTGGTGATCA CGCCGTACAT CAGCGACAGA
AACCTGCCCT ACGTCAAGGC CATGGCCGAG AGACTGGGAG TAAAGATAGT AACGCCAGAA
GAGGCGGCGC AGAAACCGGC GTAG
 
Protein sequence
MSLAEEVKRV LLEHPEILAE ALLAHPEVVY QALAKLAPWE RLATKEDIER LRSEMATKED 
LERLRSEVAT KEDLEKVRAV MATKEELRSL EERLGKVEKR LDEIDAQLRF LAIRVEALGA
RWSVVSEEAF REGVREVLRE AGFVVEKWLY YDGEGFIYGY PSEVELDVVV RDGVTMAVEI
ASSLKRADLH AVRRKAELYE KATGRKVDRV VVITPYISDR NLPYVKAMAE RLGVKIVTPE
EAAQKPA